Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06095 ATGTGGTGGATGATGGGCGAAACTGGAGGCAATTACTGTTCTAAGAAGAGCGATGATTTGTGTAGCAATGTTTGTGGCCAGGAATCAAGTCAAGCATCGGGCATGTCAAGAATCCGCTGCATTTTGCGTGGTTTGGATGTGAAAACATATATATTCCTGTTTGCCATTGTCCCAATGTGCATCCTTGGAATCTATATACATGGACAGAAGATCTCTTACTTTCTGCGGCCACTATGGGAAAAACCACCCAAGCCTTTCCATGTCATCCCTCATTACTATAATGAAAATGTTACCATGGAGAATCTCTGCAGACTTCATGGCTGGGGAGTTCGTGAGTATCCAAGAAGAGTTTATGATGCTGTGTTGTTCAGTAATGAGTTGGAAATACTTACCCTGCGCTGGAAAGAATTGTACCCTTACATAAATGAATTTGTTCTCCTTGAGTCAAATTCTACATTTACTGGATTGCCTAAGCCTCTGGTTTTCAATAGCAATAGGGAGCAGTTCAGGTTTGTTGAGCCCCGGTTAACTTATGGGACTATTGGTGGGAGATTTAAGAAAGGAGAAAACCCATTTGTTGAGGAGGCATATCAGCGTGTGGCATTGGATCAGCTCCTTAAGATAGCCGGTATTACAGATGATGACTTGTTGATTATGTCTGATGTGGATGAGATACCAAGCGCTCATACTATTAACCTGTTGAGGTGGTGTGATGAAATACCTTCAATCCTTCATCTACAGCTGAAGAATTATCTCTATTCATTTGAGTTTCGTCTGGATGATAAGAGCTGGAGGGCTTCAATTCACAGATATCAGAGTGGCAAGACAAGGTATGCACATTACCGCCAGTCTGATGTATTATTGGCAGATGCTGGTTGGCATTGTAGCTTTTGCTTCCGTCGAATCAGTGATTTCATTTTCAAGATGAAAGCCTACAGCCATTATGATAGAGTCAGGTTCTCTCATTACTTAAATCCAGAAAGAATTCAGAAAGTTATCTGCAAAGGGGCTGATTTATTTGATATGCTGCCTGAGGAGTACACTTTCAAGGAAATCATTGGTAAAATGGGACCAATACCCCATTCCTATTCTGCAGTTCATCTTCCTGCTTTCCTTCTGGAAAATGCAGAGAAGTATAAATTTCTCTTGCCTGGAAATTGCAAGAGAGAGAGATGA 1176 0.4141 MWWMMGETGGNYCSKKSDDLCSNVCGQESSQASGMSRIRCILRGLDVKTYIFLFAIVPMCILGIYIHGQKISYFLRPLWEKPPKPFHVIPHYYNENVTMENLCRLHGWGVREYPRRVYDAVLFSNELEILTLRWKELYPYINEFVLLESNSTFTGLPKPLVFNSNREQFRFVEPRLTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSAHTINLLRWCDEIPSILHLQLKNYLYSFEFRLDDKSWRASIHRYQSGKTRYAHYRQSDVLLADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPERIQKVICKGADLFDMLPEEYTFKEIIGKMGPIPHSYSAVHLPAFLLENAEKYKFLLPGNCKRER. 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06095 391 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Seca12g06095 391 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 35 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06095 Seca-Chr12 152816885 152818836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06095 1 390 Glycosyltransferase AT1G12990 79.744 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06095 K00737 - gmx:100787062 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06095 12 152816885 152818836 Seca12g06095 12 152816885 152818836 ECH