Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06092 ATGCTACTCTCTGCAATCACCACTCACACTCTTCCTTCACCCACTCTCACCTTTAACCTCTCCAACTTCAAATCCCACAGACTGTTCTCAAATTCTCTCTCCCGCAACCTCCTTCCCAACCCTTCCTGCTTCCTCCAAACCCTCAACCCCAACCCTAACTCCGATTCCGATGACGATTCCCTTAACAACTCCACCACCGTGTCTTCCGCCGCCGCCCTTGCCTCCGCTATTCGCAAAGCCTCCACCTCACCTGTCGAGTTCACCCAGCGAGTCGAGAAGGATCGCAGAAGTGGACTCCTTCTTCCCAGCACTGACTTCCACAGACTCTGCCTCCAACAGCTCCAACTCCTCCGCAGAATCGTTCCCGAATCCCTAATCTCGGTATATGTTAGACCAGCTGGTAGTTATGTGATGGATCGGTTGGAGCTCCGGAGGGTTGCTCTGTACCCTGAAGATGCAGAGGCAGAGAGCATTGTCATACTTGTGGGGCATTTTAATATCCCTGCTGGCTTGCGTGCTGCCGAGGCCATGCTTTCTGAGTTGCAAGTCAAGGTTGTCCCTGAATGTAAGGCTGTGGTTCTTCCCATGGTGAAACACCCGTTTGTTGTTGGGTTTTTGGTTGCTGAGCTTCCATTGGTGGAGCTGGAAACGGGTGAGAAGCCTCAAAGGGATGGGCCAGATAACCGCATATCTGCTGAAGAAGTTTATTCCTTGCCTCCTTTTTTGGATTTGGATAAGAAGTCATGGGAAATTCAGACCTTTCGGGTCAAGGATGAGCCAGTTGGTATGCGCAACTTCACTTCTGAGCAAAGATCAAATGCTGTCAACATTTCACAGTCTCTAGCTATGGCATATGTTATGGATCAGAAAGCACTGTTACTTCAGCAATCAACATGGCAAAATAATGTCAGGATGAGCAATCTGGTTGAGCAAATTCGTGGTCCACTTTCAAGCATTCAAACCTTAAGTAAAATCCTGTCTACACAAACAAAGAAAAGTCAGATTTCATATGACATTGTTGAAGACATCTTGGTGCAAGGTGATCGTCTGAGAGATGTTCTCCAACAACTCCAGGATGCTGTATATTTGACAAAGGCTAATATAGTACGCTACAATGAAGAAGCAATCAAGAAAATGAATGGTTCTACTCACATACTTGCTGAGTCAGTGAGATCTCAATTGTCAGATAGCTCTCCAAGGGATGACTCTGCAAATAAAAGTAAATCTGGTGAGCCACTTTCTCTTAGTGCTGCTGCCCAGGATATAGAGATGCCACTACCACCTTTGGCTCTTGCTCCACTACAACAAGGAATCAGGAAGACCATGCGATGTTTCTGA 1338 0.4709 MLLSAITTHTLPSPTLTFNLSNFKSHRLFSNSLSRNLLPNPSCFLQTLNPNPNSDSDDDSLNNSTTVSSAAALASAIRKASTSPVEFTQRVEKDRRSGLLLPSTDFHRLCLQQLQLLRRIVPESLISVYVRPAGSYVMDRLELRRVALYPEDAEAESIVILVGHFNIPAGLRAAEAMLSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETGEKPQRDGPDNRISAEEVYSLPPFLDLDKKSWEIQTFRVKDEPVGMRNFTSEQRSNAVNISQSLAMAYVMDQKALLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILVQGDRLRDVLQQLQDAVYLTKANIVRYNEEAIKKMNGSTHILAESVRSQLSDSSPRDDSANKSKSGEPLSLSAAAQDIEMPLPPLALAPLQQGIRKTMRCF. 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06092 445 MobiDBLite consensus disorder prediction 390 413 - -
Seca12g06092 445 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 10 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06092 Seca-Chr12 152786535 152791704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06092 - - lja:Lj4g3v2730370.3 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06092 12 152786535 152791704 Seca12g06092 12 152786535 152791704 ECH