Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06083 ATGGCTGGCGCCGGCGACCTAGATGCCGATGCGGTGCTCAGCGATGTCGAGGACGACGGCAGTGATCCAATTCCGATTGCGACGGTGCCACCGTCGCCGGAAGACGTGTCCGTTGAAAGGCTCCGGGAGGTTCTCGGCGAGCTCGATCGGGAACGGCAAGCGCGCCTCGCCGCGGAGAATTCGAAGTCGGAGTTGCAGGTTTCTTTCAACCGATTGAAGGCGTTGGCTCATGAGGCCATAAAGAAGCGCGACGAGTTCGGGCGGCAGCGAGACGACGCCGTTCGGGAGAAGGAAGAGATGGCGAAGCAACTGGAAGAGGCGGCGAAGGAGCGTGAAGCGCTGCGATCGGAGATTGGGAATTCGAGCCATATGCTGGTAACCGGCATGGAGAAGATCTCGGCGAAAGTCAGCGGTTTCAACGGCGGTAGCGCGTTGCCGCGGTCTCAGAAATACACCGGTATGGCGGCGGTGGCGTATGGTGTGATCAAGAGGGCGAATGAGATCGTTGAAGAGCTGTTGAGACAGAACGAAGCAAGTGCCAAGTCTAGGGACCAGGCTAGGGAACAGATAGAGCAGAGGAATTATGAGATTGCCATTGAGGTTTCTCAGCTTGAAGCAACTATCAGTGGCTTGAGGGATGAGGTTGCCAAGAAAACTTCTCTCGTTGAGGGTTTGGAGAGGGATTTAGGGGTTAGGGATCAGAAGTTGAATGACATTTCGGAGAGTTTAAGCAAAGAACAAAGTGAGGGTTTGCAGTTGAAGGAGTCTGTCAGTGAGTGTGAGGACAAGTTGAGTAAGTTGGAAGCAAAAACAGAATCCCTGAGGCCTTTGTTGATTGATCAATTGAGTTTTATGTCCAAAATTCATAACCAGATTTGCAATGTTATTAAGATAATTGACGATGGCAGTAACTCGGAACTGTCTGAATCGTTGTTTGTACCGCAAGAAACAGATATTGAGGAGAATATACGTGCCTCTTTGGCTGGGATGGAATCCATATATGAGTTGACTAGGATTGTTGTTCAAAAGGCTAGGGATGTGGTTGAGGAGAAGAATCGTGAGATCAAGAGTTTAGATGAGAATGTGACTCGGTTAGTTAAGGAAAAGGATCAAATTGGGTCTTTGCTTAGGAGTGCTTTGTCGAAGAGGATGGCATCCGAACCATCTTCTAGAAAAAGTGAGTTGTTTTTAGCAGCAGAGAATGGGTTGAAGGAGGCTGGGATAGATTTCAAATTTAGTAAGCTTCTTGGAGATGGAAAGCTTGCAGCTTCAAATGACAAGCAACACTTAACGGAAAAAGAAGAGGAGGATGAAATATACTCTCTGGCTGGTGCTTTGGAGGATGTTGTTAAGGCATCTCAGCTCGAGATCATTGAGCTGCAGCACACTGTGGATGAATTAAGTTGTGCTGACATCATAACTTTTTTTTTCTTTGCACATTGCTTAACTGCATTAAGGGCAGAGTTGAGTTTACTTAAGCAGCACATAGAAGCTCAGGCCAAAGAGCTTGACCATAGAATGCATCGGATAGAGGAACTTGAAGAGAAGGAGAGAGTGGCAAATGAAAATATTGAGGGACTAATGATGGACATTGCTGCTGCTGAAGAAGAAATTAACAGATGGAAAGTGGCAGCAGAGCAGGAAGCTGCTGCAGGCAGAGGCGTTGAACAAGAATTTGTGGCACAGTTGTCAACACTTCGGCAGGAACTTGAAGATGCAAAGCAATCCATGTTGGAATCAGAGAAGAAACTAAAATTCAAGGAAGAGACGGCAGCTGCTGCCATGGCAGCCAGAGATGCAGCAGAGAAATCTCTTAAGTTGGCAGACATGAGGTCTTCTAGACTAAGGGACAGAGTGGAGGAGCTCACTCATCAGCTCGAAGAGTTTGAAAACAGGGAAGACTCAAGAGGCCGAAATAGGCCTAGATATGTGTGCTGGCCATGGCAGTGGCTCGGCATGGACTTTGTTGGATTTCAGCAGCGGCCTGACACACAACAAGAGCCTTCTAACGAAATGGAGCTTTCTGAACCCCTCTTATAA 2040 0.4799 MAGAGDLDADAVLSDVEDDGSDPIPIATVPPSPEDVSVERLREVLGELDRERQARLAAENSKSELQVSFNRLKALAHEAIKKRDEFGRQRDDAVREKEEMAKQLEEAAKEREALRSEIGNSSHMLVTGMEKISAKVSGFNGGSALPRSQKYTGMAAVAYGVIKRANEIVEELLRQNEASAKSRDQAREQIEQRNYEIAIEVSQLEATISGLRDEVAKKTSLVEGLERDLGVRDQKLNDISESLSKEQSEGLQLKESVSECEDKLSKLEAKTESLRPLLIDQLSFMSKIHNQICNVIKIIDDGSNSELSESLFVPQETDIEENIRASLAGMESIYELTRIVVQKARDVVEEKNREIKSLDENVTRLVKEKDQIGSLLRSALSKRMASEPSSRKSELFLAAENGLKEAGIDFKFSKLLGDGKLAASNDKQHLTEKEEEDEIYSLAGALEDVVKASQLEIIELQHTVDELSCADIITFFFFAHCLTALRAELSLLKQHIEAQAKELDHRMHRIEELEEKERVANENIEGLMMDIAAAEEEINRWKVAAEQEAAAGRGVEQEFVAQLSTLRQELEDAKQSMLESEKKLKFKEETAAAAMAARDAAEKSLKLADMRSSRLRDRVEELTHQLEEFENREDSRGRNRPRYVCWPWQWLGMDFVGFQQRPDTQQEPSNEMELSEPLL. 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06083 679 Coils Coil 250 270 - -
Seca12g06083 679 Coils Coil 90 117 - -
Seca12g06083 679 Coils Coil 208 228 - -
Seca12g06083 679 Coils Coil 612 632 - -
Seca12g06083 679 PANTHER OS08G0559800 PROTEIN 1 468 IPR040300 -
Seca12g06083 679 Coils Coil 482 551 - -
Seca12g06083 679 Coils Coil 162 189 - -
Seca12g06083 679 Coils Coil 341 368 - -
Seca12g06083 679 MobiDBLite consensus disorder prediction 1 35 - -
Seca12g06083 679 Coils Coil 556 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06083 Seca-Chr12 152695297 152701690 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06083 - - gmx:100800693 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06083 12 152695297 152701690 Seca12g06083 12 152695297 152701690 ECH