Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05723 ATGGATCCAGACGCGTTGGCAAAGGCATTCGTGGAGCACTACTACACCACCTTCGATACCAACCGTTCTGGCCTCGCCAACCTCTACCAAGAAGGCTCTATGCTCACCTTTGAGGGTCAGAAGATCCAAGGCTCTCCCAACATCGTCGCCAAACTCACCTCCCTCCCTTTCCAGCAGTGCCACCACTCCATCACCACCGTCGACTGCCAGCCCTCCGGCGTCAACGCCGGCATGCTCGTCTTCGTCAGCGGCAACCTCCAGCTCGCCGGCGAACAGCACGCCCTTAAATTCAGCCAGAGCCAAATCCTTGATTCTGAAGGCTGGCAAAAAGTTTCCTATTTGCACATTAGATACCATAGCAAATTTTGA 369 0.5447 MDPDALAKAFVEHYYTTFDTNRSGLANLYQEGSMLTFEGQKIQGSPNIVAKLTSLPFQQCHHSITTVDCQPSGVNAGMLVFVSGNLQLAGEQHALKFSQSQILDSEGWQKVSYLHIRYHSKF. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05723 122 CDD NTF2 2 103 IPR018222 -
Seca12g05723 122 Gene3D - 1 118 - -
Seca12g05723 122 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 122 IPR018222 -
Seca12g05723 122 Pfam Nuclear transport factor 2 (NTF2) domain 7 107 IPR002075 -
Seca12g05723 122 PANTHER NUCLEAR TRANSPORT FACTOR 2 2 105 IPR045875 GO:0006913
Seca12g05723 122 FunFam Nuclear transport factor 2 1 116 - -
Seca12g05723 122 SUPERFAMILY NTF2-like 3 103 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05723 Seca-Chr12 148922505 148924758 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05723 - - gmx:100777334 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05723 12 148922505 148924758 Seca12g05723 12 148922505 148924758 ECH