Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05705 ATGTATGGAAAAGTGGTTCTCTCATTCATTTTCGTGCTCCTGCTCCTCATTTCTTACTCAATTTTCATAGGCACTCTCGACATTCGATCTTATTTCTTCCCACTCTTAAAATCATCCCCCATTGCACCCGCTCCGTGCTCGCTCGACCCGCCCCTCCGTGTCTACATGTACGATCTTCCCCGCCGCTTTAACGTCGGCATGATTAGTCGCCGGAACTCGTCGGAATCCCCCGTCACCGCCCAGGACTTTCCGCCGTGGCCGGAAAACTGGGGGCTCAAGAAGCAGCACAGCATGGAGTACTGGATGATGGGCTCGCTCATCCACGAAGGCGACGACGGTGAGCGCAGAGATGCCATCAGGGTTTCGGATCCGGAACTCGCCGACGCGTTCTTCGTTCCTTTTTTCTCTTCTTTGAGCTTCAACTCGCACGGACACAACATGACGGATCCCGAAACGCAGATTGATCGCCAATTGCAGGTTGATGTAATGGAATTCTTAAGCAAATCCAAATACTGGCAGAGGTCTGGAGGTAGGGATCACGTCTTTCCTATGACACACCCCAATGCCTTTAGGTTCCTACGAAATCAAGTGAATGAATCTATTCAGGTTGTTGTGGATTTTGGCCGCTACCCCAAGGGCATGTCTAATTTGAACAAAGATGTGGTGTCCCCATATGTACATGTTGTGGATTCTTTTACAGATGATGAGTCTCAAGATCCGTATGAGTCTCGTTCCATGTTGCTTTTCTTCCGAGTGAGGACTTTCAGGAAGGATGAAGGCATTGTCCGTGTTAAACTAGCAAAGATATTGAGTGGTTATGATGATGTTCACTATGAGCGAAGTGTTGCTACAGGAGAAAACATAAAAGCGTCATCTAAAGGGATGCGGTCATCAAAGTTCTGTTTGGATCCAGCAGGAGACACACCATCATCTTGCCGTCTTTTTGATGCCATTGTGAGTCACTGTGTTCCTGTCATTGTGAGTGATCAAATTGAACTCCCATTTGAGGATGAGATTGACTACTCCCAGTTCTCAGTATTCTTCTCTTTCAAAGAGGCATTACAGCCTGGCTACATGATCGACCAGCTTCGTAAATTTCCAAAGGAGAAGTGGACTGAAATGTGGAGGCAGCTTAAAAACATCTCCCATCATTATGAATTCCACTACCCTCCAAAAAGAGAAGATGCTGTTAATATGCTGTGGAGACAGGTTAAACACAAGCTTCCAGGGGTCAGACTTTCTGTTCATAGAAACCGAAGATTAAAAATCCCAGATTGGTGGTAG 1284 0.4673 MYGKVVLSFIFVLLLLISYSIFIGTLDIRSYFFPLLKSSPIAPAPCSLDPPLRVYMYDLPRRFNVGMISRRNSSESPVTAQDFPPWPENWGLKKQHSMEYWMMGSLIHEGDDGERRDAIRVSDPELADAFFVPFFSSLSFNSHGHNMTDPETQIDRQLQVDVMEFLSKSKYWQRSGGRDHVFPMTHPNAFRFLRNQVNESIQVVVDFGRYPKGMSNLNKDVVSPYVHVVDSFTDDESQDPYESRSMLLFFRVRTFRKDEGIVRVKLAKILSGYDDVHYERSVATGENIKASSKGMRSSKFCLDPAGDTPSSCRLFDAIVSHCVPVIVSDQIELPFEDEIDYSQFSVFFSFKEALQPGYMIDQLRKFPKEKWTEMWRQLKNISHHYEFHYPPKREDAVNMLWRQVKHKLPGVRLSVHRNRRLKIPDWW. 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05705 427 Pfam Exostosin family 50 359 IPR040911 -
Seca12g05705 427 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 51 399 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05705 Seca-Chr12 148671020 148676719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05705 - - gmx:100817069 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05705 12 148671020 148676719 Seca12g05705 12 148671020 148676719 ECH