Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05495 ATGGTGGCCAGAGGCGTGCCGACGGAGGCGGTGATGGCCGTGGCCGCCCTTAACTTCACCGAATCCTCCAACTGGTGGCGGGACATCAACGACTCTCCGTTCTGGCAGGATCGTATCTTCCACCTCCTCGCAATCCTCTACGGAATCGTAGCCGCCGTCGCTCTGGTTCAACTAGTTCGAATACAATTGAGAGTGCCGGAATATGGTTGGACCACGCAGAAGGTCTTTCACTTTCTCAATTTTTTGGTGAATGGGGTTCGATGTTTTGTTTTTGTCTTCCGTCGGGATGTGCAGAAGTTGCAGCCAGAGATTGTCCAACATATCTTGCTTGACATGCCTAGCCTTGCTTTCTTTACAACTTATGCGCTTTTGGTCCTGTTCTGGGCTGAGATTTATTATCAGGCAAGTTTAATTTGTTGTGCATATACTATTGCACGCGCTGTATCTACAGATGGTCTCAGACCAAGTTTCTACACAATTAATGCTGTGGTTTATGTTGTTCAGGTTAAGAATCTTGCCCATGATTTCTCTTGTGGTCCCCACAGTAGGATTGTTTTGTGGTTGATATTATGGTGGAAACCTATCAGTGTGCTGGCCATCCTGTCTAAGATGTTCTTTGCAGGGGTCTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTATGGTGGAAGATTATTCTTGATGCTGCAACGCTTTCCTGTTGAATCCAAAGGTCGACGGAAGAAGCTGCAAGAGGTTGGCTACGTGACTACCATATGCTTTTCATGTTTCCTTATCAGATGTGTTATGATGTGCTTCAATGCATTTGATAAAGCTGCTGATCTTGATGTCTTGGACCATCCCATTCTAAACCTTATATATTACCTGTTGGTGGAAATATTACCTTCTTCTTTGGTTCTTTTCATTTTGAGGAAGTTACCACCTAAGCGGGGTATCACACAATATCACCCCATTCGCTGA 957 0.4535 MVARGVPTEAVMAVAALNFTESSNWWRDINDSPFWQDRIFHLLAILYGIVAAVALVQLVRIQLRVPEYGWTTQKVFHFLNFLVNGVRCFVFVFRRDVQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQASLICCAYTIARAVSTDGLRPSFYTINAVVYVVQVKNLAHDFSCGPHSRIVLWLILWWKPISVLAILSKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDKAADLDVLDHPILNLIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05495 318 PANTHER TOBAMOVIRUS MULTIPLICATION PROTEIN 1-LIKE ISOFORM X1 22 316 IPR040226 -
Seca12g05495 318 Pfam THH1/TOM1/TOM3 domain 22 318 IPR009457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05495 Seca-Chr12 145839395 145849603 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05495 - - gmx:100811134 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05495 12 145839395 145849603 Seca12g05495 12 145839395 145849603 ECH