Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05492 ATGCTACTGGGTGTGGAGAAGAAGAGGAAAGAAGAGGAAGAGCTTGATTCTACTTTCACACCGAGATCTCAAAATTCAGACATGGATGAATCTGGTGGTAGCAGTTCTGATCATTGTAAAGACGTAGATGTTGTGAGCGTCCTTCCTGAATATTCAACCTCTTTATCTCGCACCTGTAGCATAGAGGCAGTTGGCGGTGATCGTATTGTGAAGGCTAATGCAGTAATGGCTTCAAGAAGTAGAATCCTAGAAGACCCTTCTTTAGATTATGATAGTGGGCATGATAATATGAGCATTTCCTCATCGATGTTTGAATTTCAAAAGGCTGAGCGTGCTCCACAGAGAGTGCCCATGGGGCCATTCTCAAAACCAGCACCATCTAAATGGGATGATGCCCAGAAGTGGATAGCAAGTCCAACATCAAACAGGCCAAAGACAGCACAGACCCAGGGGCAAGGTGGTCATGCAGGATCACGTAAGGTTGGTAGTCTTGGTTATGGAAGCCGGCAACCTTCAATGAAGGTTGTTGTTGAAGTTCCAGATCAAAGAGAAATCGGTTTAGATGAACCAGATACCAAGCAAATTGATACAAATCAAACTAAGATGGATAGTGGAGGACAGAAGTTTGAGAGCTGGGATGCCGACCCCTATGCAATTGCAAATTCTTATGTTAGTCTCAGCCAGCATAATTCATCCATTGCCATCCAGAGTGCAACAACATTTGTTCCTCCTCCTTCAACAGCTCGGTCTGTATCAATGAGAGATATGGGTACAGAAATGACACCTATTGCTAGCCAGGAGCCATCAAGAACAGGTACACCAGTGAGATCAACAACACCAATGCGCAGCCCTAATTCTTCCCAGCCTTCTACTCCTACAAGAACTTCTCCTGTATCAACTTTAACTGATCTACATAGTGACAATCTGAATCTAAACAAGAATGAATTGTCTGAAAAGGAGCTACAAATGAAAACCAGGCGAGAAATAATGGTCCTTGGGACACAACTAGGTAAAATGAACATTGCTGCTTGGGCTAGCAAAGAAGAGGAGGATAAGGATGCATCCACTTCACTGAAAACAAAAAATGCTGAACAACCAGCTAAGAATGTCATTGAAGCACGTGCTGCAGCATGGGAGGAGGCTGAAAAAGCCAAATATATGGCCAGATTTAGGCGCGAGGAGATGAAAATTCAGGCATGGGAAAATCATCAGAAAGCAAAAACAGAAGCCAAGATGAAAAAACTTGAGGTAGATGTTGAAAGAATACGTAGTAAGGCACATGATAAGCTCATGAATAAATTAGCAACAGCAAGGCACAAAGCTGAGGAAAAGAGAGCAGCTGCAGAAGCCAATAAAAATCATCAAGCTGCAAAAACTGAAGAGCAAGCAGAATATATACGAAGAACTGGTCATGTACCTTCCTCATATTTATCATTTTCTTGCTGCAGTTGGTGTTCTTAA 1461 0.4271 MLLGVEKKRKEEEELDSTFTPRSQNSDMDESGGSSSDHCKDVDVVSVLPEYSTSLSRTCSIEAVGGDRIVKANAVMASRSRILEDPSLDYDSGHDNMSISSSMFEFQKAERAPQRVPMGPFSKPAPSKWDDAQKWIASPTSNRPKTAQTQGQGGHAGSRKVGSLGYGSRQPSMKVVVEVPDQREIGLDEPDTKQIDTNQTKMDSGGQKFESWDADPYAIANSYVSLSQHNSSIAIQSATTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRSTTPMRSPNSSQPSTPTRTSPVSTLTDLHSDNLNLNKNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKTKNAEQPAKNVIEARAAAWEEAEKAKYMARFRREEMKIQAWENHQKAKTEAKMKKLEVDVERIRSKAHDKLMNKLATARHKAEEKRAAAEANKNHQAAKTEEQAEYIRRTGHVPSSYLSFSCCSWCS. 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05492 486 Coils Coil 405 425 - -
Seca12g05492 486 Coils Coil 427 460 - -
Seca12g05492 486 MobiDBLite consensus disorder prediction 1 18 - -
Seca12g05492 486 MobiDBLite consensus disorder prediction 138 171 - -
Seca12g05492 486 MobiDBLite consensus disorder prediction 259 316 - -
Seca12g05492 486 MobiDBLite consensus disorder prediction 1 41 - -
Seca12g05492 486 MobiDBLite consensus disorder prediction 138 156 - -
Seca12g05492 486 MobiDBLite consensus disorder prediction 262 311 - -
Seca12g05492 486 Pfam Remorin, C-terminal region 371 474 IPR005516 -
Seca12g05492 486 PANTHER OS02G0116800 PROTEIN 76 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05492 Seca-Chr12 145815983 145822980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05492 - - gmx:100787310 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05492 12 145815983 145822980 Seca12g05492 12 145815983 145822980 ECH