Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03733 ATGGGTAAGCACCTCTTGTTACTGGGTCTCACTCTTCAGCTCCTCCTTGCCTCCCTCTCACTCTCAGTCTCAGCTGCACCATCCACTACTTCCCCTGCAAAAATCGTTAGTGGGTTTATCTCCAATGCTGTCCCTGCTTTCACCAAATGGGTGTGGTCACTCAAGGCCACTACCAAAACGGCGGTTTCGAGCCGGTCGATGATGAAGTTTGAGAGTGGGTACAATGTAGAGACTGTGTTTGATGGAAGCAAGCTTGGAATCGAGCCTTATTCTGTTGAGGTGTTGTCTAATGGGGAGCTTCTGATTCTGGATTCGGCTAATAGTAACGTTTATAGAATCTCATCCTCACTTTCTCTGTACAGCAGACCGAAGTTGGTGGCTGGATCAGCCGAAGGATATGCTGGACATGTTGATGGGAAGCTCAGGGAGGCTAGGATGAACCATCCTAAGGGGATAACTGTTGATGACCGAGGAAATATTTATGTTGCAGATACTTCGAATATGGCAATTAGGAAAATTAGTGATTCAGGTATGATAATCATTCATCCTCCTCTCCGGGTCACAACGATTGCTGGAGGAAAATGGAGCCGTGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTAGGAAGTAGTTGTTCCCTACTCATTGTAGACAGAGGAAACCGAGCCATCAGGGAGATACAACTCCACTTTGATGATTGTGCCTATCAATATGGAAGTGGATTCCCACTTGGAATTGCAATGCTTGTTGGGGCTGGATTCTTTGGTTATATGCTGGCATTGCTACAGCGTAGGCTTGGTACAATTGTAGCATCCCAGGATGCTCAGGTTCCAGTAACAGTAATGTCCTCTGTTTCTCCAAGTCCATATCAAAAGCCCTTGAAATCTGTCAGGCCTCCTTTAATTCCATCAGAATATGAACCCGATAAGCAGGAAGAAGGTTTCTTTGGATCACTTGGGAAACTTCTTGCAAATGCTGGTGTATCAATGGTGGAGATAATGGGAGGATTATTTCCTGTTTTCAGAAGAAGACCACAGAGCCACCAATTTCAAAGGCAACAGCTGTTCCAACAACCTCAGAAGCAAGTAAATGATTGGCCTGTGCAGGAAAGTTTCGTGATTCCCCACGAAGATGAGCCTCCTTCTATTGACACAAGAGCCCCAACCCCGCGAAAAACTTATCCTTTCATGTCTAAGGATGCAGAAAAAATGCAACAATTGCGGCAAAGTAGAGCATTCTATAGTGGATGGGATGGAGATCTTCAACAACAACAACAGCAGCAGCAAAAACATCATCATCGTCATCAGTACCGTTCATTGATTCCCCACACTTACTATGAGCAGAGCCATGAGACAACCAATGAGATAGTGTTTGGGGCAGTGCAGGAACAGGATGGGAAGCAGGAGTCTGTGGTTATCAAGCCTGTGGATTATGGGGGCTCACTGTATGAACATCACAATATGAGGTCTAGAATGAGTTCCATGGGTTATACCCACAACTACAAGTATTGA 1548 0.4528 MGKHLLLLGLTLQLLLASLSLSVSAAPSTTSPAKIVSGFISNAVPAFTKWVWSLKATTKTAVSSRSMMKFESGYNVETVFDGSKLGIEPYSVEVLSNGELLILDSANSNVYRISSSLSLYSRPKLVAGSAEGYAGHVDGKLREARMNHPKGITVDDRGNIYVADTSNMAIRKISDSGMIIIHPPLRVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLIVDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLGTIVASQDAQVPVTVMSSVSPSPYQKPLKSVRPPLIPSEYEPDKQEEGFFGSLGKLLANAGVSMVEIMGGLFPVFRRRPQSHQFQRQQLFQQPQKQVNDWPVQESFVIPHEDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLRQSRAFYSGWDGDLQQQQQQQQKHHHRHQYRSLIPHTYYEQSHETTNEIVFGAVQEQDGKQESVVIKPVDYGGSLYEHHNMRSRMSSMGYTHNYKY. 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03733 515 Pfam NHL repeat 147 172 IPR001258 GO:0005515
Seca12g03733 515 PANTHER - 33 513 - -
Seca12g03733 515 Gene3D - 34 240 IPR011042 -
Seca12g03733 515 SUPERFAMILY NHL repeat 75 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03733 Seca-Chr12 95863613 95867419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03733 - - gmx:100781836 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03733 12 95863613 95867419 Seca12g03733 12 95863613 95867419 ECH