Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03688 ATGTTTCATGTATTCAGTCTTCATTGGAGCTTGATCATTATTTGTATTCCGGACAAAAAGGATGAATCGGGGCCAATCGTACTTCATTTGGATTCTTTGAGTCTTCACTCTAGCAAATCAGTTTTTGATAATATTAGAAGCTATTTGGTTGAAGAAAGGAACTATTTGGATCGAGAAGGTGTTTCTTCAGACATTTCGATTGCAGACAGAATATGGAAGTCCCTTCCTCGTAGAATTGAAGCTCAAGTTATAACGGTTCCCCAACAGAAGAATGAGTATGACTGTGGTCTTTTTGTACTGTACTTCATTGAGCGTTTCATGGAAGAGGCTCCTGAAAGACTGAAAAAGAAAGATTTAGCTATGTTTGGAAAGCGATGGTTCAAACCTGAAGAGGCATCCAGTTTGAGAGTGAAAATAAAGGAATTGCTTGTAGCAGAACTTCAAAATTCAATCAGGCTAAATTGTAGCGCGCAATCTTCTCCTTCGTCATCTGCTGACACTGCAACTGAACATGTTGAGACTCGAAAGGATCCTTTGATCTAA 543 0.3886 MFHVFSLHWSLIIICIPDKKDESGPIVLHLDSLSLHSSKSVFDNIRSYLVEERNYLDREGVSSDISIADRIWKSLPRRIEAQVITVPQQKNEYDCGLFVLYFIERFMEEAPERLKKKDLAMFGKRWFKPEEASSLRVKIKELLVAELQNSIRLNCSAQSSPSSSADTATEHVETRKDPLI. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03688 180 ProSiteProfiles Ubiquitin-like protease family profile. 1 106 IPR003653 GO:0006508|GO:0008234
Seca12g03688 180 SUPERFAMILY Cysteine proteinases 7 144 IPR038765 -
Seca12g03688 180 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 7 165 - -
Seca12g03688 180 MobiDBLite consensus disorder prediction 156 180 - -
Seca12g03688 180 Pfam Ulp1 protease family, C-terminal catalytic domain 6 132 IPR003653 GO:0006508|GO:0008234
Seca12g03688 180 Gene3D Adenoviral Proteinase; Chain A 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03688 Seca-Chr12 94356612 94358880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03688 K16287 - gmx:100790705 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03688 12 94356612 94358880 Seca12g03688 12 94356612 94358880 ECH