Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03657 ATGATGGGTGAGTCAGAGGTTACAAAATTCAGCTTAAAAGTCAGGAAGAATGAAAAAGATGGGTTTCCAAGGCTTGATCCTGCAATACCTAATTTTTTTGTGCAGTTCCCTCACAGGTTTCAAAATATTCTAAAGTCACAGCTGAGTAGATTAGCAAAACAGAATGGAATGAATTTGGTGAGATCTGGACAGAGAAATGAGAATAGATCTTTCAGTGCCTCTGAAGCTGAACTGAATGAGCAACTGCAAGCATGGAGAGCAAATCCTTCTTGGGTTGATAAACCACCACAAATAAAGCTCAGAAACTGGATCAAACAAGGCAATGGTAACACACATTTAGGCCTGGATCCTAGTGGAAGTAGACGTAAAAATCCAGTGACTGTTCCCAAAGGCTCTCTTTGCAACCTCAATGTAGAAGTTGATGTTGGGCTGCCCCCTGATGCAGTATATAATATAGTGACAGATCCTGACAATAGGAGAGTTTTCAAAAATATCAAAGAAGTGATATCCAGAAAAGTTTTGGTTAATGAGGGTCATAGGCAAGTGGTTGATCTTGAGCAAGCAGCCATTTGGAGATTTCTTTGGTGGTCTGGGACTATCTCGATTAATGTTTTGGTAGATCAAAACAGAAAAGATCACACTATGAAGTTCAAGCAAACCAAGACTGGATTCATGAAAAAATTTGAGGGCTGCTGGAGAGTAGAACCTTTATTTGTTGATGAAGCAATCTGCTATCCCTTTAAACCGATGACCAAAGATGACTATAACGCATGTACAAGAGGCAAAGGAAGAATTGGGTCTAAAGTTAGCCTGCAACAAATACTTCAGCCAGCCATTGTTCCTCCCCCTCCCATATCATGGTATTTGAGGGGAATTACCACCCGGACAACTGAGATGCTTATTACTGATCTGCTTGCAGAAAGTGCCAGAATCAGAGGAGGATATGAGGCTGAAAAGTCTAAGGAAGAGCTTCCTGGAAAAAAAGCTGACCTTGTTGCTAACACGAGTGACATCAAAGAACGATGGATTCTACGTAGAAAAAATGCAAAGCAGGGTCATAGAAGACTGCTGACTGCTAAATGA 1083 0.409 MMGESEVTKFSLKVRKNEKDGFPRLDPAIPNFFVQFPHRFQNILKSQLSRLAKQNGMNLVRSGQRNENRSFSASEAELNEQLQAWRANPSWVDKPPQIKLRNWIKQGNGNTHLGLDPSGSRRKNPVTVPKGSLCNLNVEVDVGLPPDAVYNIVTDPDNRRVFKNIKEVISRKVLVNEGHRQVVDLEQAAIWRFLWWSGTISINVLVDQNRKDHTMKFKQTKTGFMKKFEGCWRVEPLFVDEAICYPFKPMTKDDYNACTRGKGRIGSKVSLQQILQPAIVPPPPISWYLRGITTRTTEMLITDLLAESARIRGGYEAEKSKEELPGKKADLVANTSDIKERWILRRKNAKQGHRRLLTAK. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03657 360 PANTHER PUTATIVE (DUF220)-RELATED 23 347 - -
Seca12g03657 360 Pfam Domain of unknown function DUF220 197 268 IPR003863 -
Seca12g03657 360 SUPERFAMILY Bet v1-like 137 237 - -
Seca12g03657 360 Gene3D - 134 240 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03657 Seca-Chr12 93403988 93407213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03657 - - mtr:25501354 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03657 12 93403988 93407213 Seca12g03657 12 93403988 93407213 ECH