Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03419 ATGGCGACGGATCATTTGTTTCCGTGTTCAAGGAATACACACTTTTGTTTTGTTGATGGAAGAAGAAGAAGAAGACAGCAACACAAATGTGGACAAGCACACAACACAAACTTGAAAACAGAAACAACAACCAAACCAAGTTTCTCAAACATGGATTTTAGCTTCTGGTGTTTGAGCTCCCCAATCATTCCCCTCCTTGTACATTTTCTTCTTCTTGTTTCTTTCCTTTGTCCTGTTTCTTCTTCCCAAAATCAAACTTATCGACCAGAGGAAGAGTTGCGCAAGTTGAAGACCATAAGAACCCGTCTTCAACAGATCAACAAGCCTTCTGTTAAGACAATTCAGAGTCCTGATGGAGATATAATAGACTGTGTGGTGTCTCATAAGCAACCAGCTTTTGATCATCCTTTCTTGAAGGGACAGAAACCATTGGATCCTCCAGAAAGGCCCAGAGGACACCACCATAACCAAATGGGTGATTCAAATGAGAATTTTCAATTGTGGAGGTTATCTGGTGAATCATGCCCTGAAGGAACAATTCCAATTAGAAGAACAACAGAGAAAGACATGTTAAGAGCTAGCTCTATTAGCAGATTTGGAAGAAAATTAATGAGACGTGTCAGAAGAGACACTGGTGGCAATGGACATGAGCATGCAGTTGGGTATGTGACTGGGGATCAGTACTATGGAGCAAAGGCTAGCATAAACGTGTGGGTCCCACATGTTGAAAATCAATATGAATTCAGCTTGTCTCAAATGTGGGTCATCTCTGGTTCATTTGGGGAAGATCTCAACACCATTGAAGCTGGTTGGCAGGTCAGCCCAGAGCTCTATGGGGACAGCTACCCTAGATTCTTTACTTATTGGACGACCGATGCATATCAAGCGACTGGGTGCTACAATTTACTTTGCTCAGGCTTTGTTCAAACCAACAGTAAAATTGCAATTGGAGCTGCAATCTCACCAACTTCTTCATATAATGGTGGTCAATTTGATATTAGCTTACTGATCTGGAAGGATCCAAAACATGGAAATTGGTGGCTTGAGTTTGGATCAGGGATCCTAGTTGGGTACTGGCCTTCATTCTTATTTACCCACTTAGGGGATCATGCAAGTATGATTCAATTTGGTGGAGAAGTGGTGAATTCAATGTCATCAGGGTCTCACACTTCCACCCAAATGGGTAGTGGACATTTTGCAGAGGAGGGTTTTGCAAAAGCTTCATATTTTAGGAATTTGCAAGTTGTGGATTGGGATAACAATTTGATTCCTTTGTCAAATCTCAAGGTTCTAGCAGACCACCCAAATTGCTATGACATACAAGGAGGGGTTAATAATGCGTGGGGGAATTACTTTTACTATGGTGGTCCTGGCAGAAATGTGAAGTGTCCCTAA 1395 0.4186 MATDHLFPCSRNTHFCFVDGRRRRRQQHKCGQAHNTNLKTETTTKPSFSNMDFSFWCLSSPIIPLLVHFLLLVSFLCPVSSSQNQTYRPEEELRKLKTIRTRLQQINKPSVKTIQSPDGDIIDCVVSHKQPAFDHPFLKGQKPLDPPERPRGHHHNQMGDSNENFQLWRLSGESCPEGTIPIRRTTEKDMLRASSISRFGRKLMRRVRRDTGGNGHEHAVGYVTGDQYYGAKASINVWVPHVENQYEFSLSQMWVISGSFGEDLNTIEAGWQVSPELYGDSYPRFFTYWTTDAYQATGCYNLLCSGFVQTNSKIAIGAAISPTSSYNGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLGDHASMIQFGGEVVNSMSSGSHTSTQMGSGHFAEEGFAKASYFRNLQVVDWDNNLIPLSNLKVLADHPNCYDIQGGVNNAWGNYFYYGGPGRNVKCP. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03419 464 MobiDBLite consensus disorder prediction 141 158 - -
Seca12g03419 464 FunFam Putative carboxyl-terminal proteinase 237 356 - -
Seca12g03419 464 Pfam Neprosin activation peptide 113 222 IPR025521 -
Seca12g03419 464 Gene3D - 237 352 - -
Seca12g03419 464 Pfam Neprosin 246 457 IPR004314 -
Seca12g03419 464 MobiDBLite consensus disorder prediction 135 160 - -
Seca12g03419 464 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 99 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03419 Seca-Chr12 73974895 73978802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03419 - - gmx:100776135 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03419 12 73974895 73978802 Seca12g03419 12 73974895 73978802 ECH
Seca12g03419 12 73974895 73978802 Seca12g03419 12 73974895 73978802 PCT