Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03416 ATGGAAACAAAACTCAAACTCTTGTGCTTTCTTTATTGTTTGCTCATAGCAATGTGTTGCTGCTGTGGCAACCAAGTTCATGCTATTGAATCACCAAAGTACACAGTGATACTGTCAGAGTCAGATTTTGAGATCAGACTCTACAGTGAGTCCTCATGGATGTCTGCTCCTGTTTCAGGAACTTCTTTCGAGCAGTCCACCAAAACCGGATTTCACAGGTTGTATCAATATATGCATGGTGCAAATTTGAATTCTTCCAAAATTGCATTTACTGCTCCCGTCCTAACGAGGATCCCCTCATCATCATCTTCCTCTGGGGGAGATGGGTATATAGTAAGAATATACCTATCACCTCATTTTCAGGGGAAAGCTCCGCAGCCGAATCCTGAATTGAAGTTGCAGATGGAGAAATGGAAAAGTCAATGCATAGCAGTTTGGAAGTTCAGTGGGTATGCGAAGGATGATAACATTAACAAAGAAATTGAAGCTCTTGTAAGCTGCCTAAACAAGCACTCAAGTAATGGAGATTCAACTACAATACGAGATACCAGCTCCTATACCATTGCTCAATACACTGCTCCCTCTGTTAAAACTGGGCGTTTAAATGAAGTTTGGGTAAAAGTGTCAGGACTCAGAACTGATTGCTGA 648 0.4151 METKLKLLCFLYCLLIAMCCCCGNQVHAIESPKYTVILSESDFEIRLYSESSWMSAPVSGTSFEQSTKTGFHRLYQYMHGANLNSSKIAFTAPVLTRIPSSSSSSGGDGYIVRIYLSPHFQGKAPQPNPELKLQMEKWKSQCIAVWKFSGYAKDDNINKEIEALVSCLNKHSSNGDSTTIRDTSSYTIAQYTAPSVKTGRLNEVWVKVSGLRTDC. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03416 215 Gene3D Regulatory factor, effector binding domain 28 212 IPR011256 -
Seca12g03416 215 FunFam Heme-binding protein 2 29 214 - -
Seca12g03416 215 PANTHER HEME-BINDING PROTEIN-RELATED 26 207 IPR006917 -
Seca12g03416 215 Pfam SOUL heme-binding protein 29 207 IPR006917 -
Seca12g03416 215 SUPERFAMILY Probable bacterial effector-binding domain 20 208 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03416 Seca-Chr12 73893971 73895524 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03416 - - psat:127074926 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03416 12 73893971 73895524 Seca12g03416 12 73893971 73895524 ECH