Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03415 ATGAGCCACAGTATCTTCCACCAGACTCTGCTTTGTCAAACTCAAACGGTTGCGGAGCATCAAAGTAAGGTTAGTTCTCGCGGTATACCGGCCAACACTTTATTCCAATCGCTGAGTGCGAATAAAGAAAAGAAGCTTCTGCTTTCTACAAATCTTCGCGGGAACAGGTTGTGTGTGAGGAAACGAAAACTCGCCATGGGAAAACACCGTCATGCCGCGGCTATTCCACGCGCTGTGTTAACCACGAATCCGGCTTCTGAGCTTTCAGGGAAGTTCAACCTTGATGGAAATATTGAATTGCAGGTTGGTGTTAGTTCTTCAGTACCAGGAGTTGCAACACAAGTAGATATTCAGGTTTCAAATAGTAGTGGCTCTCTGGTTTTACATTGGGGAGTTATATGTGATGGGCAAGGGAAGTGGGTACTCCCTTCTCGTCGCCCAGATGGAACTAAAAATTATAAGAACAGAGCTCTTAGAACTCCTTTTGTCAAATCTGGCTCGGGATCCTTCCTTAAAATAGAAATTGACGATCCTGCTGCACAAGCCATTGAGTTTCTTATACTTGATGAAGCTCAGAATAAGTGGTTTAAAAACAATGGCGAGAACTTTCACATCAAGTTACCAGCTGTTGCAACCGGGGTCACAATGCCGGCAAAAGATAAGCCAGTACAACAAGTTTCAATTCCTGAAGACCTTGTACAAATTCAAGCATATCTTAGGTGGGAACGAAAGGGTAAGCAGATGTACACCCGAGAGCAAGAGAAGGAGGAATATGAAGCAGCTCGAGGTGAACTGTTGGAGGAAGTAGCTAGGGGTACTTCCATACAAGACCTCCGTGCAAGGTTGACTAACAAAACTAATGCTGCTGAAGTAAAGGAGCCAGTAAAGGAGTCAGTAAAGAAGCCAGTAAAGGAGCCTTCTGCTTCTGAAACAAAGACCATCCCTGATGAACTTGTACAGATTCAAGCTTTTATACGCTGGGAAAAAGCTGGGAAGCCTAATTACTCTGCAGAACAACAACTTATGGAATTTGAGGAAGCAAGAAAAGAATTGTCAGCTGAGCTTGAGAAGGGTGCTTCTCTAGATGAGATACGGAACAAGATTATCAAAGGAGAGATACAAACTAAAGTTGCCAAGCAATTGAAAACCAAAAAATACTTTCGTGTTGAAAGAATACAAAGGAAAAAGAGAGATTTGATGCAGCTTATCAACAGAAATGTTGCTGAAAATATAGTTGAAAAATTTGCAGATGCTCCAAGTCCAAAGGCCTTGACTGTAATTGAACGCTATGCCAAGGAAAGGGAAGAATATGATAGGGATACTGTTTTAAATAAGACAATTTACAAGCTTGCTGATAATGATCTTCTGGTCCTTGTTACCAAAGATGCTGGTAAGATTAAGATTCACCTGGCAACAGACTCCAAAATACCTGTTACACTTCACTGGGCCTTATCTAGAACAACACCTGGAGAGTGGTTGGTACCACCTGCAAGTGCTCTTCCCCCCGGATCTGTTACTCTGAATCAGGCTGCTGAAACACCTTTTAAAGCTGGTTCTTCATCTCTTCCTTCTTATGAGGTCCAGTCCCTAGATATAGAGGTTGATGATGATACTTTTAAAGGAATTACTTTTGTCATTCTGTCAGAAGGAAATTGGATAAAGAACAATGGATCAAATTTTTATATTGAATTTGTTGGGAAGAAGCAGATACAAAAGGATTTTGGTGATGGAAAAGGTACAGCGAAGTTCTTGTTGGATAAAATAGCAGAAATGGAAGGTGAGGCACAAAAGTCCTTTATGCATCGATTTAACATTGCATCGGATTTGATAGATGAAGCCAAAAATGCTGGTCAGTTGGGTCTTGCGGGGATTTTGGTGTGGATGAGATTCATGGCTACAAGGCAGCTCATATGGAACAAAAATTACAATGTGAAGCCACGTGAGATAAGTAAAGCACAGGATAGGCTTACAGACTTGCTGCAGAATGTTTATACAAGTTATCCACAGTATAGAGAACTTGTGAGGATGATCTTTTCTACTGTTGGTCGCGGAGGTGAAGGTGATGTGGGACAGCGGATTCGAGATGAAATCCTTGTTATTCAGAGAAAAAATGATTGCAAGGGTGGAATGATGGAAGAATGGCACCAGAAGTTACACAATAATACTAGTCCTGATGATGTTGTAATCTGTCAGGCTCTAATTGATTATATAAATAGCGACTTTGATATTGGTGTTTACTGGAAAACTTTGAATGACAACGGAATAACAAAAGAACGTCTTCTGAGCTATGACCGTGCCATTCATTCTGAACCAAATTTTAGGAGAGATCAGAAGGAAGGTCTTTTGCGAGATCTGGGACACTACATGAGGACATTGAAGGCAGTTCATTCAGGTGCAGATCTTGAATCTGCTATTACAAATTGTTTAGGCTACAAATCTGAGGGTCAGGGCTTCATGGTTGGGGTGCAGATAAATCCTGTGCCTGGTTTGGCATCTGGTTTTCCTGAATTACTTCAGTTTGTCATGGAACACATTGAAGATAAGAATGTTGAACCACTTCTTGAGGGTTTGCTAGAGGCTCGTCAGGATCTCCGACCATCACTCAATAAATCTCAAAGTCGTCTGAAAGATCTTTTATTTTTGGACGTTGCTCTTGATTCTACAGTTAGAACAGCAGTGGAAAGGGGATACGGGGAATTAAACAATTGTGGAGCTGAGAAAATAATGTACTTCATCTCCTTGGTTCTTGAAAATCTTGCACTTTCATCAGACGACAATGAAGATCTTATCTACTGTCTGAAGGGATGGGATGTCGCCTTAAGCATGTGCAAGAGTAAAGACAGTCACTGGGCATTGTATGCAAAATCAGTCCTTGACAGAACACGCCTTGCACTTGCAAACAAAGCAGAGTCATATCAGAAAATTCTGCAACCATCGGCAGAATACCTTGGATCACTACTTGGCGTGGACAGATGGGCTGTGGAAATATTTACTGAAGAAATAATCCGTGCTGGATCTGCTGCTTCTTTGTCTACTCTTCTAAATCGACTGGATCCTGTACTCCGAAAGACAGCTCATCTTGGAAGCTGGCAGGTGATCAGCCCAGTTGAAACGGTCGGATACGTTGAGGTTGTGGATGAGTTGCTTTCTGTTCAAAACAAATCATATGAGCGGCCTACAATTTTGATAGCCAAGAGTGTGAAAGGAGAGGAAGAAATTCCAGATGGTACAGTTGCTGTCCTGACACCTGATATGCCAGATGTCCTATCTCATGTTTCTGTACGAGCAAGAAATAGCAAGGTGTGTTTCGCCACATGCTTTGATCCCAATATCCTGGCTGACCTCCAAGCAAATAAAGGAAAGGTCTTGCGTTTAAAGCCTACATCTGCTGATGTAGTTTATAGTGAGGTTAAGGAGGGTGAGCTTATCGATGACAAATCAACTCACCTGAAAGAAGTTGGTTCTGTATCACCCATATCTTTGGTCAGAAAGCAGTTTAGTGGAAGATATGCTGTCTCATCTGAAGAATTCACTGGTGAAATGGTTGGAGCTAAATCTCGTAATATTGCTTATTTAAAAGGAAAAGTGCCTTCTTGGATTGGAATTCCTACCTCAGTTGCCTTACCATTTGGAGTTTTTGAGCATGTTCTTTCTGATAAATCAAATCAGGTAGTGGCTGAGAAGGTCAATATTTTGAAAAGGAAGTTAACTGAGGGAGACTTCAGTGCCCTTAAGGAGATTCGTGAAACAGTTTTACAGTTGAATGCACCATCGCAATTGGTAGAGGAGTTGAAAACTAAGATGAAGAGCTCTGGAATGCCTTGGCCAGGTGATGAAGGTGAACAACGCTGGGACCAAGCATGGAAGGCTATAAAAAAAGTGTGGGGCTCTAAGTGGAATGAAAGAGCATACTTCAGCACAAGAAAAGTGAAACTCGACCACGATTATCTTTCCATGGCTGTCCTTGTGCAGGAAGTGATAAATGCTGACTATGCTTTTGTCATCCACACAACTAATCCATCCTCTGGAGACTCGTCGGAAATATATGCTGAGGTGGTAAAGGGACTTGGAGAAACACTGGTTGGAGCTTATCCTGGCCGTGCTTTGAGTTTTATCTGTAAAAAACATGATTTGAACTCCCCTCAGGTCTTGGGTTATCCTAGCAAACCTGTTGGCTTATATATTAGACGGTCAATTATTTTTCGATCTGATTCCAACGGTGAAGATCTAGAAGGTTATGCTGGTGCTGGCCTTTATGACAGTGTGCCAATGGATGAAGAGGAGAAAGTGGTGCTTGATTACTCATCAGACCAACTGATTATTGATGGTAGTTTTCGCCAGTCAATCTTGTCAAGCATTGCGCGTGCAGGAAATGCAATTGAAGAGTTGTATGGCTCCCCTCAGGATATTGAAGGTATCATCAGGGATGGAAAAGTCTATGTTGTCCAGACCAGACCTCAAATGTAG 4467 0.4195 MSHSIFHQTLLCQTQTVAEHQSKVSSRGIPANTLFQSLSANKEKKLLLSTNLRGNRLCVRKRKLAMGKHRHAAAIPRAVLTTNPASELSGKFNLDGNIELQVGVSSSVPGVATQVDIQVSNSSGSLVLHWGVICDGQGKWVLPSRRPDGTKNYKNRALRTPFVKSGSGSFLKIEIDDPAAQAIEFLILDEAQNKWFKNNGENFHIKLPAVATGVTMPAKDKPVQQVSIPEDLVQIQAYLRWERKGKQMYTREQEKEEYEAARGELLEEVARGTSIQDLRARLTNKTNAAEVKEPVKESVKKPVKEPSASETKTIPDELVQIQAFIRWEKAGKPNYSAEQQLMEFEEARKELSAELEKGASLDEIRNKIIKGEIQTKVAKQLKTKKYFRVERIQRKKRDLMQLINRNVAENIVEKFADAPSPKALTVIERYAKEREEYDRDTVLNKTIYKLADNDLLVLVTKDAGKIKIHLATDSKIPVTLHWALSRTTPGEWLVPPASALPPGSVTLNQAAETPFKAGSSSLPSYEVQSLDIEVDDDTFKGITFVILSEGNWIKNNGSNFYIEFVGKKQIQKDFGDGKGTAKFLLDKIAEMEGEAQKSFMHRFNIASDLIDEAKNAGQLGLAGILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTDLLQNVYTSYPQYRELVRMIFSTVGRGGEGDVGQRIRDEILVIQRKNDCKGGMMEEWHQKLHNNTSPDDVVICQALIDYINSDFDIGVYWKTLNDNGITKERLLSYDRAIHSEPNFRRDQKEGLLRDLGHYMRTLKAVHSGADLESAITNCLGYKSEGQGFMVGVQINPVPGLASGFPELLQFVMEHIEDKNVEPLLEGLLEARQDLRPSLNKSQSRLKDLLFLDVALDSTVRTAVERGYGELNNCGAEKIMYFISLVLENLALSSDDNEDLIYCLKGWDVALSMCKSKDSHWALYAKSVLDRTRLALANKAESYQKILQPSAEYLGSLLGVDRWAVEIFTEEIIRAGSAASLSTLLNRLDPVLRKTAHLGSWQVISPVETVGYVEVVDELLSVQNKSYERPTILIAKSVKGEEEIPDGTVAVLTPDMPDVLSHVSVRARNSKVCFATCFDPNILADLQANKGKVLRLKPTSADVVYSEVKEGELIDDKSTHLKEVGSVSPISLVRKQFSGRYAVSSEEFTGEMVGAKSRNIAYLKGKVPSWIGIPTSVALPFGVFEHVLSDKSNQVVAEKVNILKRKLTEGDFSALKEIRETVLQLNAPSQLVEELKTKMKSSGMPWPGDEGEQRWDQAWKAIKKVWGSKWNERAYFSTRKVKLDHDYLSMAVLVQEVINADYAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFICKKHDLNSPQVLGYPSKPVGLYIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEEKVVLDYSSDQLIIDGSFRQSILSSIARAGNAIEELYGSPQDIEGIIRDGKVYVVQTRPQM. 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03415 1488 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 1180 1487 - -
Seca12g03415 1488 Coils Coil 251 271 - -
Seca12g03415 1488 Gene3D - 1173 1327 IPR013815 GO:0005524
Seca12g03415 1488 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC-RELATED 66 305 - -
Seca12g03415 1488 Coils Coil 334 357 - -
Seca12g03415 1488 Gene3D - 1328 1487 - -
Seca12g03415 1488 MobiDBLite consensus disorder prediction 291 311 - -
Seca12g03415 1488 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 1285 1487 IPR002192 GO:0005524|GO:0016301|GO:0016310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03415 Seca-Chr12 73866132 73886280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03415 124 315 Glycoside Hydrolase AT1G69830 28.788 4.68e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03415 K08244 - gmx:100802675 2561.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03415 12 73866132 73886280 Seca12g03415 12 73866132 73886280 ECH