Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03393 ATGCAAGAAGAAGAAATTGAAGCTCCCATCCATGGGGACATCTTAGAAGCTATACTCTCACACGTGCCACTCATTCATTTGGTGCCAGCTCGTCACGTGTCAAAGGCCTGGAAGCATGGTGTATTAAGCTCCCTCTGCCACGTCAACCCCGTCAAGCCGTGGCTCACGGTGCACACCCAGAGCCACCGTGCCCCGCACGTGACAAACTCGTACGCGTACGACCCACGCTCGCGCGTCTGGGTAGAGATTCACGCGCTGCCAGTCAACCACTCTTCCCCTATCAGATCGTCGAACTCAACACTTCTCTACACGCTCTCTCCCGCCGAGTTCTCCTTCTCCATCGACCCGCTCCATGTCGAATGGCAGCACACGCGCGCCACGCGCGTGTGGCGCGTCGACCCCATCGTCGCGCGCGTGGGGAGTCTCATCGTAGTCTCCGGCGGCGCGTGCGACTTCGAAGACGATCCACTGGCGGTGGAGATGTACAACACGGAGTCCCGTGCGTGGGTTCGGTGCCAGTCCATGCCGGCGATACTGAAGGAGTCAACGGCGTCAACGTGGCTCTCAGTGACCGTCGCCGGTGGCAGGATGCACGTGACGGAGAAAAACTCCGGCGTGACGTACACGTTCGATTGCGACACTAAGATATGGCAGGGGCCGTACGACCTGCGACCCGACGAAAGCGTGTTCTACTGCGTGACAGAAACGGTGAAGAACCATTTGGTGGTGGTGGGGATGATTGGGGATGCGGAGAACGTGAAGGAAGTGAAGTTATGGGAAGTGAAAGGGGAATTAGGGTTGGGATCGGAGTACTGGTGTGAGGAATTGGGGACGATGCCGAAGGAGATGGTGGCGAAGCTGAAAGGTGAGGATGGCACTGCAGTGGTGGCGTCAATTGCGGTGAATTCGATAGGGGATTTTTTGTACTTGCTGAACCCGTCGGAGCCAGAGGAGATGGTGGTGTGCGAGGTTGTGAACGGGGGAGGGTGTAAGTGGGGGAGTGTGAGGAACGCGGTGGTGAACGATGTGACTCGAACGGGGAGAATGGTGTTTTGCGGCGGCGATGTGGGATTAGAGGATTTGCAGAGGGCAATTACACAGAATTGTAAGTTTGAGGTGAAAGAAGAATAA 1131 0.5685 MQEEEIEAPIHGDILEAILSHVPLIHLVPARHVSKAWKHGVLSSLCHVNPVKPWLTVHTQSHRAPHVTNSYAYDPRSRVWVEIHALPVNHSSPIRSSNSTLLYTLSPAEFSFSIDPLHVEWQHTRATRVWRVDPIVARVGSLIVVSGGACDFEDDPLAVEMYNTESRAWVRCQSMPAILKESTASTWLSVTVAGGRMHVTEKNSGVTYTFDCDTKIWQGPYDLRPDESVFYCVTETVKNHLVVVGMIGDAENVKEVKLWEVKGELGLGSEYWCEELGTMPKEMVAKLKGEDGTAVVASIAVNSIGDFLYLLNPSEPEEMVVCEVVNGGGCKWGSVRNAVVNDVTRTGRMVFCGGDVGLEDLQRAITQNCKFEVKEE. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03393 376 Gene3D - 54 285 IPR015915 GO:0005515
Seca12g03393 376 SUPERFAMILY Kelch motif 53 255 IPR015915 GO:0005515
Seca12g03393 376 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 11 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03393 Seca-Chr12 72675430 72676560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03393 - - gmx:100799807 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03393 12 72675430 72676560 Seca12g03393 12 72675430 72676560 ECH