Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03263 ATGGCAACAAAGAGCAAGGTTCTTGTTGTGGGGGGAACTGGGTACATAGGGAGGAGGATAGTGAGGGCAAGTCTAGCACAGGGCCATGAAACCTATGTGCTTCAACGCCCAGAATTGGGCCTCCAAATTGAGAAACTGCAGAGGCTTCTCTCATTCAAGAAACAAGGTGCTCGTCTTGTTCAGGCCTCTTTTTCAGATCACAAAAGCCTTGTGGATGCGATCAAACAAGTTGATGTTGTCATCAGTGCCATCTCTGGTGTTCATATTAGGAGTCACAGCATCAGCTTGCAACTCAAACTAGTTGAGGCCATCAAAGAAGCTGGGAACATTAAGCGCTTCTTGCCTTCAGAATTTGGTCTAGACCCAGCAAGGATGGGACATGCATTAGAACCAGGAAGGGTAACATTTGACGATAAAATGGCTATAAGGAAAGCAATAGAGGAAGCTAACATCCCTTTCACTTATATCTCTGCAAACCTTTTTGCTGGTTACTTTGCTGGCAGCCTCTCTCAAATGGGGTCTTTTGTGCCTCCAAGGGACAAGGTCCATCTCTTTGGAGATGGCAAACTCAAAGCTATTTTTTTGGATGAAGATGATGTTGCAACATATACAATCAAGTCAATAGACGATCCTCGAACCTTAAACAAAACTTTGTACCTGAGGCCACCAGAAAATATTCTCTCCCAAGGAGAACTTATTGGAATTTGGGAGAAACTTATTGGAAAGGAACTAGAGAAAACATACATTCCTCCAGAGGAGTTCCTTAAAATATTGAAAGGGATGGATTATAAACTCCAAGTAGCGATTGGGCATTTCTATCATATTTTCTACGAGGGATGTTTAACAAATTTTGAAATTGGAGATGATGGAGAAGAAGCATCCAAGCTTTACCCTGAGGTGAACTACACACGGATGGATGAGTACCTAAAAATTTATGTGTAA 942 0.4225 MATKSKVLVVGGTGYIGRRIVRASLAQGHETYVLQRPELGLQIEKLQRLLSFKKQGARLVQASFSDHKSLVDAIKQVDVVISAISGVHIRSHSISLQLKLVEAIKEAGNIKRFLPSEFGLDPARMGHALEPGRVTFDDKMAIRKAIEEANIPFTYISANLFAGYFAGSLSQMGSFVPPRDKVHLFGDGKLKAIFLDEDDVATYTIKSIDDPRTLNKTLYLRPPENILSQGELIGIWEKLIGKELEKTYIPPEEFLKILKGMDYKLQVAIGHFYHIFYEGCLTNFEIGDDGEEASKLYPEVNYTRMDEYLKIYV. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03263 313 PANTHER PINORESINOL REDUCTASE-RELATED 3 312 - -
Seca12g03263 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 269 IPR036291 -
Seca12g03263 313 Pfam NmrA-like family 7 275 IPR008030 -
Seca12g03263 313 CDD PCBER_SDR_a 6 308 IPR045312 GO:0016491
Seca12g03263 313 Gene3D - 5 298 - -
Seca12g03263 313 Gene3D - 159 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03263 Seca-Chr12 67146023 67151954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03263 K21568 - gmx:100786578 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03263 12 67146023 67151954 Seca12g03263 12 67146023 67151954 ECH