Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03250 ATGGAAGGGAGGGGTTTCTCTGGCTTATACAAGAATTCAAGTGAAGAGCTTTTCCTTAAAACTTTGATGGAAAGCCCTATTGGAATGCCAATACCAACCATGGACATGCTGAGTTTCAAGGCTGTTTCTCAAAGTTTCCGCACAGATAGTGAGGAGCTCTTCAAACGCTGGCTAACAAATGAAGAGGCAAGACCCTCTGTTAAATTATGTATTAGATCATGCTCATTCATTGTTTTCTTGCTTTTGTGTCAAGGATACAATTCATCAAGCAAAGGTCTTAATAGTCGATTATCACAGAGGATGTCCTCTGAACAATCTAATTTGTCAAATCAGCAAAATGTCTGTGTAGCTTCTGAGGGAAGAAGCAATGACAAATTATATATGCAAAATAGCCCTACTGCTAATGATTTTTCAACTGATTTCAATCAATTTCCTGTCGGAGATCCTGTTGGTAGAGAACTACAATCTAGTAACCTGTTTCTGGCCAAGGCTTGGTTTCTTAGTGATCAAAGAATGACAAGAAGCCGGTCCTCTGAATTGAGGCGGCGCTATGCTGAGATGCAAAATGCTCAGGCAACACAAGGTATGGAATCTGTGAGCATGGTGGCCACAACTCAGCATGGTGCTGACCCTACAAAGCAAGAAGTTTCAAATTTAAATGGTTTTGATTACCTTCCTATGTGTGAGCTTCCAAATCACAAGGGTGCATTTGTGTCTCCATCCAACTCATCATCATCTACCTTCAACACACATCAATTTGGTGATAACACAAATAAAGTTTCATCTTGTGTAAATATGCTAAAAGGTACATTAGAACTCAAGAGACTAAGCAGCCAGGTACAGAAACAAGCTGTAGATGATAGCTCAAATGGACTTTTTAGTCCTCAAGATGCTTTCTTCAAAACTGGTTTTAGTGAAGGAATTGAAAACTGGAGTCATCAAAATCCAATAAATGTTCAAGATGCCTCAACTGGTCAAGTTAAGGATCCTGAAGTCCTTCAGACACTTGAAGCATCCATAAACCTTGACTTGGATGGTTTATCAAATCAAACAAATCCAATATATTTGGGATCAGCTTCCCAGGAACCTTCTCAAAGTGAATCTTCTGCTGCTGCGCCAGTAGTCTCTTCTGGTTTAGAGGGATGTGAGGGTCCAAGCAATTCAAGCCAAACTCTTTGTGAAAGCTCATGGAAACAAGTAGGAGTTAGTAGAAGTTCAGAAAATAGAGTCAAAGGTTTCAGAGAACAGATAGTGGATAATCTGAAAGATGATCAGAAGAAGAGAAGTCTAGAAAGATATGGATCTGTAACATCAGCTATTTCAGAGGACAAGGAGAATTCCACAAAAAAGCGTAGGGTGGAGCGCTCACGAAAAATGGCTGAGGCAAAGGAAAGGAATTTGACACCAACCGTTCCCTCAGATATGCAAGCTGTCCTGAAGCGATGTGAAAACCTTGAGAAGGAAGTTAGATCACTGAAACTTAATTTATCCTTCATGAATAGGAAGGATTCTGAACAAACAAAGCAGATAGAGGACCTTCAGAAGCAAAATGAAGATTTAGCAGATGAAAAAGAGCGCCTTCTGGAAGAGATTGAAAGAATTATATCAAAAACTGGAAAGGTCTAA 1626 0.3973 MEGRGFSGLYKNSSEELFLKTLMESPIGMPIPTMDMLSFKAVSQSFRTDSEELFKRWLTNEEARPSVKLCIRSCSFIVFLLLCQGYNSSSKGLNSRLSQRMSSEQSNLSNQQNVCVASEGRSNDKLYMQNSPTANDFSTDFNQFPVGDPVGRELQSSNLFLAKAWFLSDQRMTRSRSSELRRRYAEMQNAQATQGMESVSMVATTQHGADPTKQEVSNLNGFDYLPMCELPNHKGAFVSPSNSSSSTFNTHQFGDNTNKVSSCVNMLKGTLELKRLSSQVQKQAVDDSSNGLFSPQDAFFKTGFSEGIENWSHQNPINVQDASTGQVKDPEVLQTLEASINLDLDGLSNQTNPIYLGSASQEPSQSESSAAAPVVSSGLEGCEGPSNSSQTLCESSWKQVGVSRSSENRVKGFREQIVDNLKDDQKKRSLERYGSVTSAISEDKENSTKKRRVERSRKMAEAKERNLTPTVPSDMQAVLKRCENLEKEVRSLKLNLSFMNRKDSEQTKQIEDLQKQNEDLADEKERLLEEIERIISKTGKV. 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03250 541 MobiDBLite consensus disorder prediction 443 464 - -
Seca12g03250 541 MobiDBLite consensus disorder prediction 355 390 - -
Seca12g03250 541 MobiDBLite consensus disorder prediction 427 472 - -
Seca12g03250 541 PANTHER PROTEIN CYCLOPS 1 540 IPR040036 GO:0005634|GO:0036377|GO:0043565
Seca12g03250 541 Coils Coil 475 537 - -
Seca12g03250 541 MobiDBLite consensus disorder prediction 355 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03250 Seca-Chr12 66691251 66696009 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03250 - - gmx:100811742 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03250 12 66691251 66696009 Seca12g03250 12 66691251 66696009 ECH