Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03203 ATGAGTGCATTCAAAAGAAAACAGATAATGGGTGCAGATGGCCACACCAACCCCTTAGTGTGGCTAGTAGCCATTATCTGCACCATCTTAGCCGTAGCTGTGGTAGTTGCAGGCATTGTAGTGTTCATTGCTTACTTGGTGATCCACCCCAGGGTACCCGTCATCAGTGTTACCAATGCTCATCTTGACCTTCTGAGAAATGATTATGCTGGCCTGCTCCAAACCCAGCTCAGCATTGTTGTGAGTGCACAGAATGGGAATGCTAAGGCTCATGCAACGTTTTCTGACATAACCTTCAACCTTAGCTACCAAGGCCAAGGCATAGCAGTGCTGGTTGCTGATCCATTTGAGGTGCCTAAGAACAGTTCAAAAGATCTCAACTATGTTGTTCAATCATCATCTATACCATTGACTCCTGATCAAATGGAGGAAGTGGATGCCTCATGGAAACGAAATGAGATTAGTTTTGATTTCAAGGGAGCTGCTAGGACACGTTGGAGGGTAGGGCCTTTAGGCTCTGTTAAGTTCTCATGTCATCTGGATTGTGACCTCAAGTTCCACCCTGGGAATGGGAGTTACATACCCTCGAGGTGCTCCTCCAAATCAAAATGA 612 0.4608 MSAFKRKQIMGADGHTNPLVWLVAIICTILAVAVVVAGIVVFIAYLVIHPRVPVISVTNAHLDLLRNDYAGLLQTQLSIVVSAQNGNAKAHATFSDITFNLSYQGQGIAVLVADPFEVPKNSSKDLNYVVQSSSIPLTPDQMEEVDASWKRNEISFDFKGAARTRWRVGPLGSVKFSCHLDCDLKFHPGNGSYIPSRCSSKSK. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03203 203 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 24 199 - -
Seca12g03203 203 Pfam Late embryogenesis abundant protein 81 180 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03203 Seca-Chr12 65271773 65272384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03203 30 184 EF-hand Containing Proteins AT5G21130 21.875 7.74e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03203 - - gmx:100797168 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03203 12 65271773 65272384 Seca12g03203 12 65271773 65272384 ECH