Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03192 ATGGAGAACAATGGGGAAATCAATAAAACTAATAGCAGAAATGGTAGCTTCAGGTTGGGGTTGGGATTGGGAGTGAACGAAGCAAAAGTTCACACCGTTGTTGACACACACAGTCTTCTTCTTCTAGATGGTGGCGATGTTGATGTTGGTGTTGGTGATGAGAGAGAGACACAGCACACACAGAAGAAACCTCTTACAAACTCTCTCTCTCCAAGGCAGATGAAGTCCCTCGTTGCTCTCTGTGACACCATCTTACCTTCCATCAAACACAACAACGTTGTTGGTTCCTCCAATGAATCTGTTGCCAACTTCTATCGGACATCAGCTTCCATGGCTGGCACACCTGAACGTCTTGGGATATTGATAAGTGAGAAACTGAAACACCCAAGTAGAAGGTTGTTTTTGTTGACATTATGGCTATTATCAACATGGTTTGGCACATTCATTCTGTGTGGCTTGGCGAGCCTCTCAACAAAGTACCCCTTCTTCCATAGCTACCCTGATATGTCTCCGGAGAAACGCCAGAAAGTTATGCAGTCTTGGTCTCTTAGCTACTTTCGTCTTCTTAGGATGTTTTTCAGGACCACCAAACTTCTCACTCTCCTTGTCTTCTTTACTCAGCTAGATGAAGCAGAAGCCAACCCATCATGGAAGGCAATTGGATATAGTGGACCTGATCCAGAGTTCAAAGCACAGTTAAAGAACCACTTTTTGCAGAGAACATCCAGAGGAGGAGGCCAAGAGGAAAAAGAAAATAATGATGATGATGTTGCTGAAGAGGTTGTAGGACCTCTATACAAAGGTCTAATCCATCTGAATTATCCAAGAGACACTATTGCAGATTCTCTAAGAAGATTTGGATTCCCTGTCAATGTCACTCCTAGAAAGATTAAAGCTTCTAGCATCTCATCTCCTTCTCTAGTTATCCAATGTGATGCAGTGGTTGTTGGTTCTGGATCAGGAGGTGGGGTGGTAGCTGGAGTTCTAGCAAAAAGTGGATACAAAGTTCTTGTCTTGGAGAAAGGAAGCTATTCTGCTAGGAACAACCTTTCCCTTCATGAAGGACCAACCATGGATCAAATGTACCTCTCCAATGGTTTGATTGCAACAGATGATATGTCTGTACTAATTCTAGCAGGATCCACAGTTGGTGGAGGGTCTGCAATCAACTGGTCAGCCAGCATCAAAACCCCTCAGCATGTATGCAAGGAGTGGTGTGATAGCCATGAGTTAGAACTATTTGAAAGTAAATTCTATAAAGAAGCCATGGATGTTGTGTGTGAGAAAATGGGAGTCCAATCTGAGATTGAAGAGGAAGGATTTAATAATGCAGTCTTAAGAAGAGGGTGTCAAGAAATGGGATATCCTGTGAGTAACATTCCTAGGAATGCTCCACCAGATCACTACTGTGGCTGGTGTTGCATGGGATGCAAAGATGGAAGGAAGAAAGGTACATCAGAAACATGGTTGGTGGACTTGGTGAAATCAGGTAATGGAGCAATTCTTCCTAATTGTGAGGCTATACAAGTTTTACATAAGAAAAAGGAAGGAAGAGACAGGAAAATAGCATGTGGTGTTGCTTTTGCAATTGACTACAAGGGAAACAAGGACATTTGTGTGGTGAAGTCCAAGGTCACAATTGTAGCCTGTGGAGCACTCAGTACTCCTGAATTACTTAAAAAAAGTGGCTTGAAGAATGAAAACATAGGAAGAAACTTGCATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCTGACACACCTTCAGCTGACTTGTGGCCAGAGGAACATAAGAAAAGCTATGAAGGAGGGATTATGACAGCAATGTCTACAGTTGTTGCAGGGTTCAACAATTCTGGATATGGTGCAGTGATTCAAACACCTTCATTGCATCCTGGTATGTTCTCAATCCTAATGCCATGGGTTTCTGGAATGGATATAAAAGATAGAATGCACAAGTTTTCTAGAACAGCTCATGTATTTGCACTTGCAAGGGATCAAGGATCAGGAACTGTGAGTTCACCTAGCTGTATAAGTTATCATATGAAAGATGTGGACAAAGATAATTTAAAGAAAGGAATTGAGAAGGTGCTGAGAATTCTGGCAGCAGCTGGAGCTGAAGAAATTGGTACTCATAATAATAAGGGAAGGAAATTAAATGTTAAAGAGGTGAGTTATCATGAGTTTGAGAAATTTGTGAAAGAAGAAAGCTCAATGCTATTAAAAGACCTTTCAACACCAATATGTTCAGCACATCAAATGGGTAGCTGCAGAATGGGTACAAAACCAAAGGAATCAGTTGTGAACCAAATGGGGGAGACATGGGAAGTGGAGGGTCTTTATTTGGCAGACACAAGTGTGTTTCCTACAGCTTTGGGTGTGAATCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACAGCACAATATATTCTTGAAGTGCTTAGAAGGAAAAGGTGA 2463 0.4202 MENNGEINKTNSRNGSFRLGLGLGVNEAKVHTVVDTHSLLLLDGGDVDVGVGDERETQHTQKKPLTNSLSPRQMKSLVALCDTILPSIKHNNVVGSSNESVANFYRTSASMAGTPERLGILISEKLKHPSRRLFLLTLWLLSTWFGTFILCGLASLSTKYPFFHSYPDMSPEKRQKVMQSWSLSYFRLLRMFFRTTKLLTLLVFFTQLDEAEANPSWKAIGYSGPDPEFKAQLKNHFLQRTSRGGGQEEKENNDDDVAEEVVGPLYKGLIHLNYPRDTIADSLRRFGFPVNVTPRKIKASSISSPSLVIQCDAVVVGSGSGGGVVAGVLAKSGYKVLVLEKGSYSARNNLSLHEGPTMDQMYLSNGLIATDDMSVLILAGSTVGGGSAINWSASIKTPQHVCKEWCDSHELELFESKFYKEAMDVVCEKMGVQSEIEEEGFNNAVLRRGCQEMGYPVSNIPRNAPPDHYCGWCCMGCKDGRKKGTSETWLVDLVKSGNGAILPNCEAIQVLHKKKEGRDRKIACGVAFAIDYKGNKDICVVKSKVTIVACGALSTPELLKKSGLKNENIGRNLHLHPVTMAWGYFPDTPSADLWPEEHKKSYEGGIMTAMSTVVAGFNNSGYGAVIQTPSLHPGMFSILMPWVSGMDIKDRMHKFSRTAHVFALARDQGSGTVSSPSCISYHMKDVDKDNLKKGIEKVLRILAAAGAEEIGTHNNKGRKLNVKEVSYHEFEKFVKEESSMLLKDLSTPICSAHQMGSCRMGTKPKESVVNQMGETWEVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQYILEVLRRKR. 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03192 820 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 66 819 - -
Seca12g03192 820 Pfam GMC oxidoreductase 312 578 IPR000172 GO:0016614|GO:0050660
Seca12g03192 820 SUPERFAMILY FAD/NAD(P)-binding domain 309 814 IPR036188 -
Seca12g03192 820 PIRSF Lg_Ch_AO 55 820 IPR012400 GO:0046577
Seca12g03192 820 Gene3D - 298 623 IPR036188 -
Seca12g03192 820 Gene3D - 738 819 IPR036188 -
Seca12g03192 820 Pfam GMC oxidoreductase 680 807 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03192 Seca-Chr12 64811248 64822389 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03192 34 816 Acyl Lipid Metabolism Gene Families AT4G19380 57.234 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03192 K17756 - gmx:100778575 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03192 12 64811248 64822389 Seca12g03192 12 64811248 64822389 ECH