Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03112 ATGGGTTTTTGGGAGCTATTAGAGGTGGCGTCTGCGCCAATTATTCAAGTCCTACTCATCAGTGCATTGGGAGCTTTTATGGCAACTGACTATTGTGATAATATTCTTTCAGCTGAATTTAGAAAATCCTTGAACAAGATTGTCTTCCTTGCATTCACTCCTTCACTTATATTTGCCAGTTTTGCAAAGAATGTTTCTCTTGACGAAATGATATCATGGTGGTTTATGCCGGTTAACATTGGATTTACCTTCTTGATTGGAGGGATTCTTGGATGGATAATTGTAAAATTACTAAAGCCAAATATGAAACTGGAAGGTCTTATTATTGCTTCATGTTCAACAGGAAATATGGGTAACCTTCCTATTGTAATTGTACCTGCTATCTGTGATCAGAAAGGAGGCCACTTTGGTACACATGATGAATGCCGCAATAGGGCACTCTCTTACTCTTTTTTCTCTTTGGCGATTGGTGGCATCTTCATCTGGACCTATACTTACCAAATGATGCGAAATAGATCCATGAGATATAAGGCTTTTGAGGCTGCTGAGATCTTAAAGATTCCCAGATCAGAACTTGATGCTAATGCAGGAACTCGCCTTCTCAAAGGAAATCACAATGAAAACACAGTGATACAAGTGAGGCAGTACAATACAGGAGACACTGAGAACCAAATTCTTGTAGATCAAGGCCCAAGCAGTGTATCAAAGAATGGGGAAATATCATTTTGGCATAGAATGATAGAAACTCTGAGCCAAATTATGGCAGAGCTAATGTCACCTCCAACAATTGCTACATTTTTAGGTTTTCTCTTTGGTGGAGTTAGATGGCTAAGGAACCTAATAATTGGACAAAATGCTCCACTGAAAGTGATCCAAGACTCCATACAAATGCTAGGGGATGGAACAATTCCTTGTATCACCATTTTGCTAGGTGGCAACCTTACACAAGGCATGAAATCATCATGTATACAACCATTGATCCTTATTTCTATCATCATAGCTCGACTTTTTCTACTACCTGCTATTGGATTTTTTATTGTTAAAGCGGCAGCCAAATTTGGTTTCCTCCCAAATGACCCTTTGTTTCAATTTGTGCTGGCAATTCAGTATGCCTTGCCACCTGCAGTGAATATTAGTACCATGGCTCAGCTGTTTGATGTAGGCACAGAAGAGTATTCAGTTATCCTGTTGTGGACATATGGTGCTGCAGCTATAGCACTCACTCTTTGGTCAACATTCCTCATATGGATATTATCTTAA 1260 0.3937 MGFWELLEVASAPIIQVLLISALGAFMATDYCDNILSAEFRKSLNKIVFLAFTPSLIFASFAKNVSLDEMISWWFMPVNIGFTFLIGGILGWIIVKLLKPNMKLEGLIIASCSTGNMGNLPIVIVPAICDQKGGHFGTHDECRNRALSYSFFSLAIGGIFIWTYTYQMMRNRSMRYKAFEAAEILKIPRSELDANAGTRLLKGNHNENTVIQVRQYNTGDTENQILVDQGPSSVSKNGEISFWHRMIETLSQIMAELMSPPTIATFLGFLFGGVRWLRNLIIGQNAPLKVIQDSIQMLGDGTIPCITILLGGNLTQGMKSSCIQPLILISIIIARLFLLPAIGFFIVKAAAKFGFLPNDPLFQFVLAIQYALPPAVNISTMAQLFDVGTEEYSVILLWTYGAAAIALTLWSTFLIWILS. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03112 419 PANTHER - 1 418 IPR045033 GO:0080162
Seca12g03112 419 Pfam Membrane transport protein 11 410 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03112 Seca-Chr12 61000837 61004429 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03112 K24139 - gmx:100787850 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03112 12 61000837 61004429 Seca12g03112 12 61000837 61004429 ECH
Seca12g03143 12 62713762 62715737 Seca12g03112 12 61000837 61004429 PCT