Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03076 ATGGCGTTCACTTTACGTAACTCTGTTTATGCTATTTTACTTTTGGCCATAATCCAATTTAAGGCCACCTCTGCCTCCTCCCATGATCATCACAAACACCTCAAATCCCTTCACTTCTCCCTGTTTCAACATGAGACTATAAACAAAACAGGGTATATCATAGTGAATGGTATAGAAGGAGGAGCAGGAATAAGTGAAACCACAACCCCTTTTGGCACCTTGTTTGTCTTTCAGGATCCTTTGACTGTCACAACCAACAGATCCTCCAAACTAGTTGGAATTTCTGAAGGAACTTCTATCACCTCTAGTCTTGATGGACTTCGTAGCATTTCGATTGCCAAGTTAACTCTCCGTTTGAAGAACCACAAGGGCTCTGTTTCCATTGTTGGTGGCACAAATAATGTCAAGCCTTCGGATCATCCCGTGGTTGGAGGCACTGAAGATTTCATGTTTGTGCAAGGTTATGTTACTTCTTCTCCAGTTGATCTTAAGGGTCTTACTGTTGTCTACAAGATTGAGTTTCATCTTTACTGGCCTCCGTATGCAATTCAAGCCTCATAA 561 0.4189 MAFTLRNSVYAILLLAIIQFKATSASSHDHHKHLKSLHFSLFQHETINKTGYIIVNGIEGGAGISETTTPFGTLFVFQDPLTVTTNRSSKLVGISEGTSITSSLDGLRSISIAKLTLRLKNHKGSVSIVGGTNNVKPSDHPVVGGTEDFMFVQGYVTSSPVDLKGLTVVYKIEFHLYWPPYAIQAS. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03076 186 Gene3D - 20 176 IPR044859 -
Seca12g03076 186 PANTHER DIRIGENT PROTEIN 1 185 - -
Seca12g03076 186 Pfam Dirigent-like protein 38 175 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03076 Seca-Chr12 60079479 60080039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03076 - - gmx:100817263 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03076 12 60079479 60080039 Seca12g03076 12 60079479 60080039 ECH