Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03063 ATGCCATGCCATCCTCCACAATTCCATGGCAGATATTTTACTTGCCACAATGGGCTGCTATGTGCTATCATAACCCTAATGCATCTCATTTACATAAGTGCTATTTCGGTTTATCTTTTGCAGGTTCGTGGTTCAATTCCAGTTGTCTGGGAGCAAATTGTTGACTTAACATATAAACCAAAGTATGAGTTATTGAAACTTGAGGAAGCTCCTCGAGTCCTAGAGCGTCATTTCTTAGATTTAAGAAAAAAATATGGGGCTGTGTTAGCTGTTGATCTTGTCAACAAGCATGGAGGAGAGGGGCGGCTATGTGAAAAATATGGAAGTACAATGCAGCATGTGGCTAGTGATGATGTCAAATATTTGCACTTTGATTTCCATCATGTCTGTGGGCACATTCATTTCGATCGTCTCTCAATCCTTTATGATCAAATTTCAGATTTTCTTGAAAGAAATGGATATCTTCTATTGAATGAAAAGAGAGAGAAAATGAAGGAGCAACTTGGGGTTGTTAGGACAAATTGTATTGATTGTTTAGACCGCACAAATGTTACTCAGAGTATGATTGGCCGAAATATGCTGGAATACCAACTCAGAAGAATTGGTGTCTTTGGTGCTGAAGAAACCATTTGTTCTCATCCAAATCTGGATGAAAGATTTAAGATCTTGTGGGCTAATCATGGAGATGATATAAGCACTCAATATACAGGCACTCCTGCTCTGAAAGGAGATTTTGTCCGTGATAATCTCATGTTAATTCTCGCAGTTAGATATGATTTTCGGCACTTCTTCCTTTCACTAATGTGGGCAAGCATTAGTGTTGGTATAGCAGCATTTGTGAGGGCCAATGGCCGGCTTTTCTGCAACAGACCTCGCCTACACAAGCCTCGGCGCTGA 897 0.4025 MPCHPPQFHGRYFTCHNGLLCAIITLMHLIYISAISVYLLQVRGSIPVVWEQIVDLTYKPKYELLKLEEAPRVLERHFLDLRKKYGAVLAVDLVNKHGGEGRLCEKYGSTMQHVASDDVKYLHFDFHHVCGHIHFDRLSILYDQISDFLERNGYLLLNEKREKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRIGVFGAEETICSHPNLDERFKILWANHGDDISTQYTGTPALKGDFVRDNLMLILAVRYDFRHFFLSLMWASISVGIAAFVRANGRLFCNRPRLHKPRR. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03063 298 Pfam SacI homology domain 40 130 IPR002013 GO:0016791
Seca12g03063 298 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 35 247 - -
Seca12g03063 298 ProSiteProfiles Sac phosphatase domain profile. 17 237 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03063 Seca-Chr12 59525072 59528163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03063 258 297 Acyl Lipid Metabolism Gene Families AT3G51460 70.000 1.24e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03063 K21797 - gmx:100780963 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03063 12 59525072 59528163 Seca12g03063 12 59525072 59528163 ECH