Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03055 GCAGAAAAGGAACCAATTTTAGACAACTTCTTCTATGCCAGTGTTCTATCACATGAATGCTTGGAGCAAGCATTGGCGTTTGTTCTTGTGAATCGTCTCCAAAATTCTACTCTTTTGGCAACTCAACTGATGGATATATTTTGCAATGTGATGATGAATGATAAAGGTATCCAGCGATCTATTCGCTTGGATATCCAGGCGTTTAAAGATCGGGATCCTGCTTGTTTCTCATATTGCTCAGCACTTTTATTTATGAAGGGTTACCATTCTTTGCAAGTATATCGAGTAGCCCATGCTTTATGGGGCCAGGGACGCCAAGTCTTGGCTTTAGCTTTGTGTAGTCGAGTTAACGAGGTATTGTTCTACTTGGTCAAAAAATTGATAAATGGTCATATTTATGTGTCATCACTAATGATTCAAGCCCTTATTTTCCCTGCTACAGCGGCGGAAATTGGGGAGGGAATTTTATTAGATCATGGGACAGGCGTGGTTATTGGTGAAACGGCTATAGTTGGAAACAGAGTTTCATTGATGCAAGTGAGTACATTTTCTTCTTCATTCATATTTTTTATTATTTGTTTTGGCTAA 588 0.3895 AEKEPILDNFFYASVLSHECLEQALAFVLVNRLQNSTLLATQLMDIFCNVMMNDKGIQRSIRLDIQAFKDRDPACFSYCSALLFMKGYHSLQVYRVAHALWGQGRQVLALALCSRVNEVLFYLVKKLINGHIYVSSLMIQALIFPATAAEIGEGILLDHGTGVVIGETAIVGNRVSLMQVSTFSSSFIFFIICFG. 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03055 195 SUPERFAMILY Trimeric LpxA-like enzymes 3 183 IPR011004 -
Seca12g03055 195 Pfam Serine acetyltransferase, N-terminal 1 92 IPR010493 GO:0005737|GO:0006535|GO:0009001
Seca12g03055 195 PANTHER SERINE ACETYLTRANSFERASE 1 183 - -
Seca12g03055 195 Gene3D serine acetyltransferase, domain 1 1 121 IPR042122 -
Seca12g03055 195 SMART SATase_N_2_a 1 93 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03055 Seca-Chr12 59304214 59305855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03055 5 186 Miscellaneous Gene Families AT2G17640 59.890 1.54e-73 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03055 K00640 - cave:132172650 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03055 12 59304214 59305855 Seca12g03055 12 59304214 59305855 ECH