Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02933 ATGAACGAAAAAATGGACAAGGAAAACGGAACGAACGAGAAAGCTTCCTCTTTGAGATGGAAAATCCTTCGTCGCGCTCTTCTTTCTCACTCCTCTCCTCCAAAACCAGATGAGCAATCTCAGTTGAATATTAAGCGCATTTCGAGAAGGACCAGTCATGGATTCAACTTGATACCCTGTCATGTTATCGACGACGAACGTGAATCAAATAAATGCGAGGGCTCTTCCACCAGGGATGCTCGCATTTGTTACACTTTGCCCATCCCTGGCGCTCCACAACTGTTGTTGACACAAAGATTAGACAACCGTGCTGACCTCAGTGATTTTGAGATATGTAACAGATACAATATTGACAACACTGGGCTTGTCTGTAATTGGCCATCAGAAGATGTTCTTGCTCACTATTGCTTGTCACATGCAGATACATTCAGGTCTAAAAAGGTTATTGAGCTTGGTTCTGGCTACGGCTTGGCTGGATTTGTTATTGCAGCTGTTACTGAGGCATCAGAAGTTGTAATCTCAGATGGAAATCCACAAGTAGTTGATTGTATCCTTTTGGTATGGTTATATGTATGA 576 0.4271 MNEKMDKENGTNEKASSLRWKILRRALLSHSSPPKPDEQSQLNIKRISRRTSHGFNLIPCHVIDDERESNKCEGSSTRDARICYTLPIPGAPQLLLTQRLDNRADLSDFEICNRYNIDNTGLVCNWPSEDVLAHYCLSHADTFRSKKVIELGSGYGLAGFVIAAVTEASEVVISDGNPQVVDCILLVWLYV. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02933 191 Pfam Lysine methyltransferase 126 178 IPR019410 -
Seca12g02933 191 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 184 IPR029063 -
Seca12g02933 191 PANTHER CALMODULIN-LYSINE N-METHYLTRANSFERASE 5 184 IPR025800 GO:0005737|GO:0018025
Seca12g02933 191 Gene3D Vaccinia Virus protein VP39 47 186 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02933 Seca-Chr12 55575726 55578259 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02933 K18826 - gmx:100778449 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02933 12 55575726 55578259 Seca12g02933 12 55575726 55578259 ECH