Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02856 ATGGCTTTCATTAAAGAGCAAGAATCAAAGAAAGAAGAAACTCAATCAAAAGAAAGCAAGTGGGCTAAATTGAAGCGTGGTGGTATTATTGGTGCTGCTGCATTAACTGGGGGAGCCTTGTTGGCTATTACCGGTGGGTTAGCTGCGCCAGCAATTGCTGCAGGACTTGGTGCTTTGGCTCCAACTTTGGGTACTCTGATCCCTGTAATTGGTGCAAGTGGGTTTGCTGCAGCTGCTAGTGCTGCAGGAACTGTTGCTGGTTCTGTCGCTGTTGCAGCATCATTTGGGGCTGCTGGAGCTGGACTTACGGGAAGCAAAATGGCCAGGAGAGTTGGGGGTGTTGATGAGTTTGAATTCAAAGCTACAGGAGAAAACCATAATCTAGGCAGGCTAGGGGTTGAGATCTTGGTCTCTGGATTTGTCTTTGAGAAGGAAGATTTTATAAGGCCATGGGAAGGAATGAATGACAACTTGGAGAGATATGCGCTTCAGTGGGAGTCTAAGAATCTGATTGCTGTGAGCACTGCAATTCAAGATTGGCTTACTTCAAGACTTGCAATGGAGCTGATGAAGCGAGGGGCAATGATGACTGTTTTGAGCACGCTTATGACTGCATTGGCTTGGCCAGCTGCATTACTTGCAGCAACTGATTTCATAGACAGTAAATGGACAATAGCTATCAACAGATCAAACAAAGCAGGAAAGTTGCTTGCTGAAGTATTATTAAAAGGATTGCAGGGAAATAGGCCTGTGACACTTGTAGGTTACTCACTTGGGGCAAGAGTTATTTTCAAGTGCCTACAGTGTTTGGCTAAAACAGAAAATGGCGCAGCTGAACTAGTAGAAAGAGTTGTACTTCTTGGAGCACCCATACCAATCAAAGATGAGAACTGGGAAGCTGCTAGAAAGATGGTAGCAGGAAGATTTGTAAATGCCTATTCAAGGAATGACTGGATGCTTGGAGTTGCCTTCCGTGCCAGTCTACTTACGAAAGGGTTAGCTGGAATCCAACCTGTCGATATTCCTGGGATACAAAACGTCGATGTGACAGATCACATCGAAGGCCATTCTTCTTATTTGTGGGCTACACAAGAGATCCTGGACCAACTTCAGTTAGATACATATTTTCCTGTTTATAACAAGGTTTCTTGCATACAGTGA 1161 0.4462 MAFIKEQESKKEETQSKESKWAKLKRGGIIGAAALTGGALLAITGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRVGGVDEFEFKATGENHNLGRLGVEILVSGFVFEKEDFIRPWEGMNDNLERYALQWESKNLIAVSTAIQDWLTSRLAMELMKRGAMMTVLSTLMTALAWPAALLAATDFIDSKWTIAINRSNKAGKLLAEVLLKGLQGNRPVTLVGYSLGARVIFKCLQCLAKTENGAAELVERVVLLGAPIPIKDENWEAARKMVAGRFVNAYSRNDWMLGVAFRASLLTKGLAGIQPVDIPGIQNVDVTDHIEGHSSYLWATQEILDQLQLDTYFPVYNKVSCIQ. 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02856 386 Pfam Protein of unknown function (DUF726) 23 372 IPR007941 -
Seca12g02856 386 Gene3D alpha/beta hydrolase 172 372 IPR029058 -
Seca12g02856 386 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 2 381 IPR007941 -
Seca12g02856 386 SUPERFAMILY alpha/beta-Hydrolases 241 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02856 Seca-Chr12 52208373 52214079 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02856 - - gmx:100777689 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02856 12 52208373 52214079 Seca12g02856 12 52208373 52214079 ECH