Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02837 ATGGGGTCTCTCAGTTTCCCCCATTTTCACCTATTTCTGATCCTCTCAGCTTCAGTAGTCTTATTCGTTGCCGAATCAAAGACATATTGGGGAGACACAGAGGTTTTGAAGGAACTAAAGAACAACATCGACGCTGCTTCTCTGAATCCAGGTTCATGTATCAACTCATGGGACTTCACTCTTGACCCATGCGACAACCTCTTTGGGGAGAAGTTCACGTGCGGGTTCAGGTGCGACGTGGTCGAGTCAGGGACGAGTCGAGTTACCGAACTCAGTCTTGACCAGGCGGGTTATGCTGGATCGCTCACCACAACTTGGAACCTTCCATATCTCCAGACTCTCGACGTTTCAAACAACTACTTCTCAGGCCAAATCCCCGAGTCATTGTCCAACTTGACTCGGCTGAGTCGACTCGGTTTGTCAAGAAACTCGTTCACCGGCGAGATACCCTCTTCCATTGGATCTCTCTATAACCTCGAAGAGCTCTACCTCGATAACAATAACCTTCAAGGAACAATCCCAGCTAGATTCAATGGCCTCAAAAACCTGAAAAGGCTTGAAATTCAATTCAACAAACTAAACGGTGAGCTTCCAAATTTGGGTTCTTTGAAAAGCCTCTATTACTTGGACATTAGCGTCAATTCCATCACCGGAGGATTGCCGGCGACGTTGCCGGAATCTTTGGTTCAGATTTCAATGAGGAACAACAGCTTAAGCGGTGCATTAGCATCTGAAAGCTTCAGAAATTTGACGTATTTGCAGGTTGTGGATTTGAGTTATAATAAGTTCAATGGCTCAATTCCCTTTGTTCTGTTTGAGCTTCCATCGTTGCAGCAATCAACACTCTCTTACAACCAATTCTCTTCCATGCAAGTGCCTTCGTATGCTTTGGACTCACAAAGTGGGATCATAGCGGTTGATCTGAGCAACAACGAGCTTCAGGGGTTTTTGCCAATGTTCATGGCACTGATGCCAAAGCTTTCGTCTTTATCCTTAGAGAATAACAAGTTCAGTGGTATGATACCGACCCAGTACGCTTTGAAAACGGTTTTTCCTGAAGCTGGGGTGTCTCCATTCGAGAGGCTTCTGTTGGGTGGAAATTACTTGTTCGGAGGAATACCAAGTCCTTTAATGGCACTGGAACCGGGTTCTGCAAATGTGAGGCTTGTTGATAATTGCTTATATAGGTGCCCTCTTAGTTTCTTTTTCTGTCAAGGTGGGGAACAAAAATCTTCTGCGGAATGTAAGCGATTCAGTCACTTCATCCCTTAG 1272 0.4536 MGSLSFPHFHLFLILSASVVLFVAESKTYWGDTEVLKELKNNIDAASLNPGSCINSWDFTLDPCDNLFGEKFTCGFRCDVVESGTSRVTELSLDQAGYAGSLTTTWNLPYLQTLDVSNNYFSGQIPESLSNLTRLSRLGLSRNSFTGEIPSSIGSLYNLEELYLDNNNLQGTIPARFNGLKNLKRLEIQFNKLNGELPNLGSLKSLYYLDISVNSITGGLPATLPESLVQISMRNNSLSGALASESFRNLTYLQVVDLSYNKFNGSIPFVLFELPSLQQSTLSYNQFSSMQVPSYALDSQSGIIAVDLSNNELQGFLPMFMALMPKLSSLSLENNKFSGMIPTQYALKTVFPEAGVSPFERLLLGGNYLFGGIPSPLMALEPGSANVRLVDNCLYRCPLSFFFCQGGEQKSSAECKRFSHFIP. 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02837 423 Gene3D Ribonuclease Inhibitor 199 416 IPR032675 -
Seca12g02837 423 Gene3D Ribonuclease Inhibitor 31 198 IPR032675 -
Seca12g02837 423 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 416 - -
Seca12g02837 423 Pfam Leucine rich repeat 134 193 IPR001611 GO:0005515
Seca12g02837 423 Pfam Leucine Rich Repeat 111 132 IPR001611 GO:0005515
Seca12g02837 423 SUPERFAMILY L domain-like 52 396 - -
Seca12g02837 423 FunFam Nuclear pore complex protein NUP107 30 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02837 Seca-Chr12 51493633 51494904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02837 74 377 Receptor kinase-like Gene Family AT3G28890 33.846 6.14e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02837 - - adu:107478747 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02837 12 51493633 51494904 Seca12g02837 12 51493633 51494904 ECH