Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02836 ATGGACCCCTTGGCCGTGCTTCCTCCATGGATCCCCGAAGACGACCTTATCCTCAAAAATGCCATCGAGGCTGGTGCTTCGCTGGAATCGCTGGCCAAAGGAGCGGTTAGGTTCTCCCGGCGGTATTCCTATACGGAATTGCGAGATCGGTGGCGCGCTCTTCTCTACGACCCCGTCGTTTCGGCCGAGGCTGCAGCTGCCATGGCGAATTTGGAGCTCGCCAAGTCCAACGGGAACGGAATCAGGGAAATCTCCGGTGACGGTGGTCGTAAGAGGAAAGCTCAGAGCGTTCGGAAGCAGTACTACGCCATGCGGAAGAGACATTGCTGTGAGGTTTATGACTCTTTCGATTTGGTTATGCATGATGAATTAAACATCGAAAAGAACGCTGTTGGAAAAGAAACTGGTGGTAATTTAAATAAAGAAATGAATAATTTGCTTGTGAATAATTTAGTTGATTATGGGAATTATTCGGGGTTAGAGGAAGCAGGGGTGGGGCCATCTCATTCAATGAGTGAAGTCCTTCCTCTGTGGAAAACAATTGAAGATGTCTCTGTGCCTGCTATGCCCGATGTCCAAGTTAGTCTTGAAAATGAAAATCCAAGCTCCGAAACCAGGGGCAAATGTGGAAATGGCGTGTTAAATGCTCCTGATGGTGCTGTGTTAGGAGAAGAGGATGCGCACATTTCTGATTCTCTCTTGGACTTGACTAATGAGGATGGGCTTTCGTTTATGGATATAGATGGGAAAGATGAGACTGTGACAGACAAGCAGGGTCTGGATAATGTTGATTCACTTCTGTTGAGTTCTCCCTGTGACATTCAGGGCAATGATGCATCTGATGTTCGTGAATCTCAAAAGTTGGATACAGCAATTAAACTTGCTATGCCGAGTGGGTCAGCTGCCCTTGAGGAAAAGGTTGCTAACCCATCAGGCAGTGGTCATGGTGATCAGCATTTTGTTTCTGATCCTGGAAATGAAGTCCAATCATCTGCTGCAGCAGCGCAAAATCCTCACCCTGAACACAATGAGGAATTTGTAGTCTGTATATTGAACACTGAGGATCCCTATATCCCATGCAATGATGGTACAATTGTATCCATTGAAGTTCCTCAGTCAGTGGCTCTAAAATCCCAACCAGTTGTTAAAGAGGTGGGTTATCCAGATTCCTCTCTTAACAATCAAAGAAAAAATGTATCAGACAGAAGCTCGACGAAAGAAGACATTCCTTCTCACTCTTTTGCAGCTTCACAGACAGTTCGATCGGGGTTAGTGCCTGATATAAATACAAGCAACTCACCTGTTGGTGTTGTACGGAGAACTGAAAATCCTATGAGTATGAGGAACTCTATTTCTGCAGTTTCCAGACAGAGTAACAATGTAATTGTCAACAACAACACCAGTCATAGCAGATTAGGTCATGCAACTATGATGCCTGCCTCAGATGGACATGTGAAACAAGAGGAAATTGATGCTCTGGCTTCAGCTGAAGTTTATGCACATCCAAGGGCAGAGGATCCTAAGGCTCTGCATAAATCAGCAGCAAAATCATTATCTCTTGATGAGGAAGGAGGTCGTGATGATGATGACGATGACGACAGTGATGACAATGACATTGACAATGAAATTCCTTACTTTTCTGATGCTGAGACAATGATTCTTGAAATGGATTTATGCCCAACTGATCAAGATCTAAATGCAAGTAGAGAAGTCTTGAGATATCAACATGAAGAAACTAAGAGGACCATCATGAGATTGGAGCAATGTGCTCAGTCCTTGACGCGAAGAGCCATTGCATCTCGAGGTGCACTTGCAGTATTGTATGGGCACACTATGAAGCATTATATTAAAAAAAGCGAGGTTATACTTGGCAGAGCAACAGATGATGTACACGTTGATATTGACTTGGGAAGAGAAGGGCTTGCTAACAAAATTTCTAGAAGACAAGTAAGATTTTTCAGAAGCTTTGGGTTGAAAATTCCTTGCATGATATATTTCACTGATGAGTTGGAAGTTCTTCTAAGTTCATATATTGATTTTACTGATGAATTGGAATTTGTAAGTCCTTTTAAGTTCATAGTAGTGGGGGAGGGGGAAGGCTTTGGTATTATCGTTTAA 2118 0.4348 MDPLAVLPPWIPEDDLILKNAIEAGASLESLAKGAVRFSRRYSYTELRDRWRALLYDPVVSAEAAAAMANLELAKSNGNGIREISGDGGRKRKAQSVRKQYYAMRKRHCCEVYDSFDLVMHDELNIEKNAVGKETGGNLNKEMNNLLVNNLVDYGNYSGLEEAGVGPSHSMSEVLPLWKTIEDVSVPAMPDVQVSLENENPSSETRGKCGNGVLNAPDGAVLGEEDAHISDSLLDLTNEDGLSFMDIDGKDETVTDKQGLDNVDSLLLSSPCDIQGNDASDVRESQKLDTAIKLAMPSGSAALEEKVANPSGSGHGDQHFVSDPGNEVQSSAAAAQNPHPEHNEEFVVCILNTEDPYIPCNDGTIVSIEVPQSVALKSQPVVKEVGYPDSSLNNQRKNVSDRSSTKEDIPSHSFAASQTVRSGLVPDINTSNSPVGVVRRTENPMSMRNSISAVSRQSNNVIVNNNTSHSRLGHATMMPASDGHVKQEEIDALASAEVYAHPRAEDPKALHKSAAKSLSLDEEGGRDDDDDDDSDDNDIDNEIPYFSDAETMILEMDLCPTDQDLNASREVLRYQHEETKRTIMRLEQCAQSLTRRAIASRGALAVLYGHTMKHYIKKSEVILGRATDDVHVDIDLGREGLANKISRRQVRFFRSFGLKIPCMIYFTDELEVLLSSYIDFTDELEFVSPFKFIVVGEGEGFGIIV. 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02836 705 MobiDBLite consensus disorder prediction 323 337 - -
Seca12g02836 705 MobiDBLite consensus disorder prediction 504 523 - -
Seca12g02836 705 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Seca12g02836 705 MobiDBLite consensus disorder prediction 198 217 - -
Seca12g02836 705 Coils Coil 576 596 - -
Seca12g02836 705 PANTHER MICROSPHERULE PROTEIN 1 8 649 IPR037912 GO:0002151|GO:0031011|GO:0071339
Seca12g02836 705 MobiDBLite consensus disorder prediction 504 542 - -
Seca12g02836 705 MobiDBLite consensus disorder prediction 301 340 - -
Seca12g02836 705 MobiDBLite consensus disorder prediction 524 542 - -
Seca12g02836 705 MobiDBLite consensus disorder prediction 386 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02836 Seca-Chr12 51426578 51431512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02836 - - lang:109333160 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02836 12 51426578 51431512 Seca12g02836 12 51426578 51431512 ECH