Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02818 ATGCAGCCCTTTTGGAAAGTTACTCCAGATGGTTCGTCAAAAGGGAATGGTGTTGTCGGTGTTCTTGAGGCCAATTTTATAGAACCTGCACATGACAAGCAGGATTTTGAGAGATCATTGCTGTTCATACGGTTGGAAGCCAAGCTGAAACAGATGGTGAATGATTACTGGTTCGTTTATATTACATTGTTTATCTTGAACAAGTTATTTTATTCTGTTCTGTATTTACATAATTAA 237 0.3713 MQPFWKVTPDGSSKGNGVVGVLEANFIEPAHDKQDFERSLLFIRLEAKLKQMVNDYWFVYITLFILNKLFYSVLYLHN. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02818 78 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 2 57 IPR045261 GO:0016887
Seca12g02818 78 Pfam Morc6 ribosomal protein S5 domain 2-like 2 57 IPR041006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02818 Seca-Chr12 50750570 50750894 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02818 - - lja:Lj0g3v0112699.1 112.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02818 12 50750570 50750894 Seca12g02818 12 50750570 50750894 ECH