Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02770 ATGGATCCAAAAGCAGTGAAGTCCACTCTTTCCAATCTGGCCTTCGGAAACGTAATGGCAGCAGCTGCCCGTGATTATCAGAAGGAATTGCTTGCTGGACAGAAGGCACAGGCATCAAGTTCTGTAAATGAGGAGGTTGACCTTGATGAGTTGATGGATGATCCTGAGTTGGAAAAACTGCATGCAGATAGGATTGCAGCTCTTAAGAAAGAAGCAGAGAAACGGGAGACGTGGAAGAAGAAAGGTCATGGGGAGTTCAGGGAGATAACTGAGGGGGATTTCTTAGGTGAGGTCACTGGAAGTGAGAAAGTGATTTGTCATTTCTACCATAAGGAGTTCTATCGATGCAAGATCATGGACAAGCATTTAAAGTCCCTTGCACCTAAGCATATTGATACAAAGTTCATCAAGATTGATGCAGAGAATGCACCATTCTTTATTGCAAAACTGGCAATCAAGACTTTGCCTTGTGTTGTATTGTTCAGACAAGGAGTTGCAGTAGATAGATTGGTAGGATTTCAAGATTTGGGAGGGAAAGATGATTTTTCCACACAAACACTGGAGGCTCTGTTGACAAAGAAAGGCATTATTGATAAGGAAGATGAGGATGATAAAGACGATGTATATCAAGAAAGTGTGCGTAGAACTGTTAGATCCTCCGTGGTTGCTAATTCTGACTCTGATTCTGATTAA 693 0.4214 MDPKAVKSTLSNLAFGNVMAAAARDYQKELLAGQKAQASSSVNEEVDLDELMDDPELEKLHADRIAALKKEAEKRETWKKKGHGEFREITEGDFLGEVTGSEKVICHFYHKEFYRCKIMDKHLKSLAPKHIDTKFIKIDAENAPFFIAKLAIKTLPCVVLFRQGVAVDRLVGFQDLGGKDDFSTQTLEALLTKKGIIDKEDEDDKDDVYQESVRRTVRSSVVANSDSDSD. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02770 230 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 230 - -
Seca12g02770 230 Pfam Thioredoxin 88 174 IPR013766 -
Seca12g02770 230 SUPERFAMILY Thioredoxin-like 43 198 IPR036249 -
Seca12g02770 230 CDD Phd_like_TxnDC9 81 191 - -
Seca12g02770 230 Gene3D Glutaredoxin 76 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02770 Seca-Chr12 49091870 49094692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02770 - - gmx:100781586 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02770 12 49091870 49094692 Seca12g02770 12 49091870 49094692 ECH