Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02763 ATGGCCCCTAACAACAACACCACAATTTTTCGCGTTTTCTGCGTCGGAACCCTCGACACCAAGCTCCACGAGCTCCGATTCCTCTCCGATTCACTTCGTTCCAATCTCAATCGCTTCTCCAATCACCCCTCCCCCAAGGTGGAGGTGGTTGTGGTTGATGTTTCTGCTGGTCCAAATGAGCCAGAAGCTTTGCAAGATTTCACATTTGTTTCCAGGAAGGATGTTATCTCTTGCTACAACAATGGATCATCAAAAGAGGCCTTGCTTCTTCCAGAGGATAGAGGCAAAGCTGTTGCTGTGATGTGCCAAGCACTTGAGCGGTTCTTGAAGAAATCTCATGAGGATGGGTGTGTTGCTGGTGTCATTGGCATTGGTGGCAGTGGAGGGACATCACTGTTGTCATCTCCCTTCAGGTCTCTCCCACTTGGGATCCCTAAACTCATTGTGTCAACTGTGGCCAGTGGCCAAACAGAACCTTATGTTGGAACCTCGGATTTGGTGTTGTTCCCCTCCATTGTGGATGTTGCTGGTGTTAATAGTGTTAGCAGGGTGGTCTTGTCCAATGCTGCTGCTGCTTTTGCTGGAATGGTTGTTGGAAGGGTTCAGAGCTTAGAGGATAATTCTCGTGTTGAAGATAAGCCTACTGTTGGTATTACAATGTTTGGGGTTACTACTCCTTGTGTTAATGCTGTCACAGATAGGTTGCACAAAGAAGGTTATGAGAGCCTGGTTTTCCATGCAACTGGGGTTGGTGGCAGGGCTATGGAGAATTTGGTTAGAGAGGGATTTATACAGGGTGTTTTTGACATCACAACAACAGAGGTAGCGGACTACGTAGTTGGAGGTGTAATGGCTTGTGACAGTTCTCGTTTTGATGCCATCATAGAGAAGAAAATCCCCCTAGTCCTGAGTGTGGGAGCATTAGACATGGTGAACTTTGGAGCAAAAGATACCATACCACAGAAATTTCAGCAGAGAAATATATATGAACATAATAAGCAGGTTTCACTCATGCGAACAACAGTAGATGAGAACAGAAAATTTGCTGATTTCATAGCAAATAAACTGAACAAATCATCATCTAAGATTTGTGTCTGCCTTCCAGAAAAGGGTGTATCTGCTTTAGATGCACCAGGTAAGCCTTTTTATGATCCAGAGGCAACAGGTACTCTTCTTCATGGACTGCAAAGGCTTATTCAGATTGGTGATGATCGACAGGTGAAGGTGTATCCTCATCATATTAATGACCTTGAATTTGCAAATGCATTGGTTGATGCATTTTTAGAGATTAATGAGAAAACTAGTAAAGATTCTACTCATCCACCATTAGCTAGTCCTGAATCTGTTGAACACTTTAATGAGGATTATGCTTCAAATGCATCAAGCGTTGGGACCATTGTCTATTCACCTAGTGAATTCCCAGATGCAAGACCAGAAACTTTGGAGAAAACACAGCTAATATTGCAACAATTGAGACATCAAATAGATAAAGGAATTCCTATAATAGGAGCTGGTGCTGGGACAGGTATATCTGCCAAGTTTGAAGAAGCTGGAGGGGTTGATATGATAGTATTGTACAATTCAGGGCGCTTCCGGATGGCTGGGAGAGGTTCATTAGCAGGTCTATTACCTTTTGCAGATGCTAATGCTGTTGTGCTTGACATGGCCAATGAAGTTTTGCCGGTGGTAAAGAAGGTTCCAGTTCTTGCTGGTGTATGTGGAACTGATCCCTTCCGCCGAATGGATTACTTCCTTAAACAGGTGGAAGCTACTGGATTCTCTGGGGTACAAAATTTTCCAACCGTTGGGTTATTTGATGGTAATTTTAGACAAAATCTTGAAGAAACAGGAATGGGATATAGCTTGGAAGTTGAGATGATCCAAAAGGCCCATAAAATGGGTCTCTTGACAACCCCATATGCATTCAATCAATATGAAGCTATTGAAATGGCTAAAGTTGGCGCTGATATTATAGTGGCCCATATGGGTCTAACTACAACAGGCTCCATAGGTGCAAAAACAGCTGTTTCAATTGAGGAAAGTGTAGTTCGTGTACAAGCTATTGCAGATGCGGCACATAGGATCAATCCTAGTGCCATTGTGCTGTGCCATGGAGGTATGCACATAACCTGGAAGCCTATGTATTTGCGCATTTTGATAGATTAA 2166 0.4335 MAPNNNTTIFRVFCVGTLDTKLHELRFLSDSLRSNLNRFSNHPSPKVEVVVVDVSAGPNEPEALQDFTFVSRKDVISCYNNGSSKEALLLPEDRGKAVAVMCQALERFLKKSHEDGCVAGVIGIGGSGGTSLLSSPFRSLPLGIPKLIVSTVASGQTEPYVGTSDLVLFPSIVDVAGVNSVSRVVLSNAAAAFAGMVVGRVQSLEDNSRVEDKPTVGITMFGVTTPCVNAVTDRLHKEGYESLVFHATGVGGRAMENLVREGFIQGVFDITTTEVADYVVGGVMACDSSRFDAIIEKKIPLVLSVGALDMVNFGAKDTIPQKFQQRNIYEHNKQVSLMRTTVDENRKFADFIANKLNKSSSKICVCLPEKGVSALDAPGKPFYDPEATGTLLHGLQRLIQIGDDRQVKVYPHHINDLEFANALVDAFLEINEKTSKDSTHPPLASPESVEHFNEDYASNASSVGTIVYSPSEFPDARPETLEKTQLILQQLRHQIDKGIPIIGAGAGTGISAKFEEAGGVDMIVLYNSGRFRMAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCGTDPFRRMDYFLKQVEATGFSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIQKAHKMGLLTTPYAFNQYEAIEMAKVGADIIVAHMGLTTTGSIGAKTAVSIEESVVRVQAIADAAHRINPSAIVLCHGGMHITWKPMYLRILID. 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02763 721 Pfam Phosphoenolpyruvate hydrolase-like 487 707 IPR009215 -
Seca12g02763 721 Gene3D Aldolase class I 479 714 IPR013785 -
Seca12g02763 721 PANTHER UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120) 10 707 - -
Seca12g02763 721 Pfam Uncharacterised protein family (UPF0261) 11 430 IPR044122 -
Seca12g02763 721 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 485 675 IPR015813 GO:0003824
Seca12g02763 721 CDD Tm-1-like 11 430 IPR044122 -
Seca12g02763 721 Gene3D Uncharacterised protein family UPF0261, NC domain 213 433 - -
Seca12g02763 721 Gene3D Uncharacterised protein family UPF0261, NN domain 3 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02763 Seca-Chr12 48953376 48957808 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02763 - - gmx:100792647 1170.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02763 12 48953376 48957808 Seca12g02763 12 48953376 48957808 ECH