Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02757 ATGCAGCAAAAAGCAATTTCTTTGACAAAGCCAATAAGAGAGGAAGCCATAAGCAGCCTCTATTGCAGCACACATCCAAGAAGCTTGGCAATTGCAGATTTGGGTTGCTCTTCTGGACCAAACACTTTGTTGGTGGTGTCAGAAGTTATCAAAACTGTGGAGAAGCTTTGCCGAGAGATGAACTATGAATCTCCCGAATACAAAGTCTTTCTGAATGACCTTCCCGGGAACGATTTCAACAACCTCTTTAGGTCCCTTGACAGCTTCAAAGAGAAACTTCGTGATGAAATGGGATCTGATGGGATTGGTCCATACTATTTCTTTGGGGCTCCTGGTTCTTTCTATGACAGAGTTTTTCCTAATCGAAGTATGCATTTTGTTCATTCCTCTTACAGCCTTCAATGGCTATCCAAGGTTCCGGAGGGTGTAGAGAACAATAGGGGCAACATTTACATCGGCAGCACAAGCCCCCCAAATGTGAACAACGCTTACTATGAGCAATTTCAAAGAGATTTCTCTCATTTTCTAAGGTGTCGTGCAGAGGAACTAGTGAAAGGGGGTTGCATGGTTCTAACATTTGTGGGAAGAAGAAGCGAAGATCGATCTAGCAAAGACTGTTGCTACATTTGGGAGCTTATGGCTATGGCTCTAAATGACATGGTCTTGCAGGGAATCATAAAGGAAGAGCAAATGGACACTTTCAACATCCCTCAATATAATCCATCCCCATCTGAAGTGATATCGGAAGTTCTCAATGAAGGATCATTTGCCATCAATCGCTTGGAGGTGTCAGAAATGAATTGGAACGTTTTCTATAACTGGAACCCTTTTGACTTTAAATTTGGAAGATCTGAAATACTCAATGATGGTGGGTACAATGTTGCACGATGCATGAGAGCTGTGGCTGAACCTTTGTTGGTTACCCACTTTGGTGAAGACATCATTCAAGAAGTTTTTAGCCGTTACCAAGAAATATTGGCTGATCGGATGTCCAAGGAGAAAACTAATAAATTCGTCAATGTCACCGTATTATTGACTAGAAAAGCATGA 1050 0.419 MQQKAISLTKPIREEAISSLYCSTHPRSLAIADLGCSSGPNTLLVVSEVIKTVEKLCREMNYESPEYKVFLNDLPGNDFNNLFRSLDSFKEKLRDEMGSDGIGPYYFFGAPGSFYDRVFPNRSMHFVHSSYSLQWLSKVPEGVENNRGNIYIGSTSPPNVNNAYYEQFQRDFSHFLRCRAEELVKGGCMVLTFVGRRSEDRSSKDCCYIWELMAMALNDMVLQGIIKEEQMDTFNIPQYNPSPSEVISEVLNEGSFAINRLEVSEMNWNVFYNWNPFDFKFGRSEILNDGGYNVARCMRAVAEPLLVTHFGEDIIQEVFSRYQEILADRMSKEKTNKFVNVTVLLTRKA. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02757 349 Pfam SAM dependent carboxyl methyltransferase 15 347 IPR005299 GO:0008168
Seca12g02757 349 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 334 IPR005299 GO:0008168
Seca12g02757 349 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 348 IPR029063 -
Seca12g02757 349 Gene3D Vaccinia Virus protein VP39 1 335 IPR029063 -
Seca12g02757 349 Gene3D - 138 333 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02757 Seca-Chr12 48817644 48821550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02757 K21483 - gmx:100813166 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02757 12 48817644 48821550 Seca12g02757 12 48817644 48821550 ECH