Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02751 ATGGATGTGACACAGGTATTGCACATGAACGGAGGCGTTGGAGAAGCAAGCTATGCTAACAACTCCTTAGTTCAGCAAAAAGCAATTTCTTTGACAAAGCCCATAAGAAAGGAAGCCATAACCAGCCTCTACTGCAGTACACTCCCTAGAAGCCTAGCAATTGCAGACTTGGGTTGCTCTTCTGGACCCAACACTCTGTTTGTGGTCTCAGAATTCATCAAAACTGTGGAGAAACTTTGCCAAGACTTTAACCATAAATCTCCTGAATACAAGGTCTTTCTGAATGACCTTCCAGGGAATGACTTCAACAACATCTTCAAGTCCCTTAACAGCTTCAAAGAGAAACTAAGTGATGAAATGGGATCAAATGGGATTGGTCCATGCTACTTCTCTGGAGTTCCTGGTTCTTTCTATGACAGAGTTTTTCCTAATCAAAGTCTGCATTTTGTCCATTCCTCTTACAGCCTTCAATGGCTATCTAAGGTTCCGGAAGGTGTAGAGAACAATAGAGGCAACATTTACATGGCCAGTACAAGCCCCTCAAATGTCATCAAAGCTTACTACAAGCAATTTCAAAGGGACTTCTCTTATTTTCTAAAGTGTCGAGCAGAGGAAGTAGTGGAAGGGGGTCGCATGGTTCTAACATTTTTGGGAAGAAGAAGCGACGATCCATGTAGCAAGGAGTGTTGCTATATTTGGGAGCTTATGGCTACGGCTCTTAATGATATGGTCTTGCAGGGAATCATAAAGGAAGAACAATTGGACACTTTCAACATCCCTTTGTATACTCCATCGCCATGTGAAGTGAAATTGGAAGTTCTCAATGAAGGGTCATTCGCCATTAATCGCCTAGAGGTGTCTGAAGTTAATTGGAATGCTTATGATGATTGGAATGCTTTTAATTTTGAATCTGAAATGTCTGAATCACTCAGTGATGGTGGATACAATGTCGCACAGTGCATGAGAGCTGTGGCTGAACCTTTGCTAATTAGCCACTTTGGTGAAGCTATTATTGAAGAAGTCTTTAGCCGCTATCAAAAAATCCTGGCTGATCGGATGTCCAAGGAGAGAACCAAGTTTTTCAATGTTACCATATTATTAACCAGAAAAACATAA 1116 0.414 MDVTQVLHMNGGVGEASYANNSLVQQKAISLTKPIRKEAITSLYCSTLPRSLAIADLGCSSGPNTLFVVSEFIKTVEKLCQDFNHKSPEYKVFLNDLPGNDFNNIFKSLNSFKEKLSDEMGSNGIGPCYFSGVPGSFYDRVFPNQSLHFVHSSYSLQWLSKVPEGVENNRGNIYMASTSPSNVIKAYYKQFQRDFSYFLKCRAEEVVEGGRMVLTFLGRRSDDPCSKECCYIWELMATALNDMVLQGIIKEEQLDTFNIPLYTPSPCEVKLEVLNEGSFAINRLEVSEVNWNAYDDWNAFNFESEMSESLSDGGYNVAQCMRAVAEPLLISHFGEAIIEEVFSRYQKILADRMSKERTKFFNVTILLTRKT. 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02751 371 FunFam Jasmonate O-methyltransferase, putative 31 163 - -
Seca12g02751 371 Pfam SAM dependent carboxyl methyltransferase 38 369 IPR005299 GO:0008168
Seca12g02751 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 370 IPR029063 -
Seca12g02751 371 Gene3D - 6 356 IPR042086 -
Seca12g02751 371 Gene3D Vaccinia Virus protein VP39 21 357 IPR029063 -
Seca12g02751 371 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 359 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02751 Seca-Chr12 48505225 48508464 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02751 K21483 - gmx:100170650 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02751 12 48505225 48508464 Seca12g02751 12 48505225 48508464 ECH