Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02742 ATGCCAATCTTTACAACTATAGCATTCGATAGGTTGATAGAGCCCAGAGCTTCCAAACATGTTCCAACCTCGATGTCTGTCCCGAAGACGCTTGAGAGGAGAAGTAGTGAACCGACTGTTAGAAAGAAGGTTCCTCCTCGTCCTCAGTTAAAGCCATCACTCTATGCCACTCCTAAGGTGACACCACTTCCAGATCCACCGTCGTCATTCCCGCCTTCTCCGTACATCGTCAATCACAAACGTCGTGGCCCACGCCTCCTCAAGAGTTTATCCGAGGCCAATGCACAAGCCAAGGAGTTTCATGATGATGAAAATGTTAATGGTAAGAGGCCTGATACTGTGGTAACTAGTTTGGCTGGTGACCTTCAAGTCACTTTCATGAACCGTGAATCTGTTAAGGAGGAACATGTGAATGGTGTACAAGATGGCAAACTAAGTAGAAGCAATGATTGTGAGCTTGGGAAAGAACAGAGGGAAAGTGAAAGTGGTAGCATTACTAATGGATTTCATAAGGAAAAAGTAGTGGCATTGAATTTGGAAAGAGATGGCGAGCATGAAGACTTTTTTGATCCACATGATTCATTGAGTTTAGCAAGTTACACGGATGGAGAGGATAATATTGAAACTGAACGTGCTATGAAATTCAGCACTCCTAGATGGGAGTTCTTTGATGCTTGGGAAGAACTCTTTTCTGATGGTGGGGCTCAAAATTCTCTACATGATGTTGAAGCTGAGTTACGTGAAATAAGGTTGAGCCTATTGATGGAGATAGAGAAGCGAAAGAAAGTTGAAGAATCCCTTAACAATATGCAGAACCAGTGGGAGAGAATTAGAAAAGGGTTCTCTCATGTAGGGATTATTTTGCCTCGAGATCTTACTAATATTGCTGAGGACGCACAATTGAGTTCTAATCTTGTGGACGATCTATGTCAACAAGTTTACATTTCTAGGTTCATATCAAACACCATTGGGAGAGGAATTGCTAGGGCTGAGGTAGAGATAGAGATGGAAGCTCAATTAGAGTCAAAGAATTTTGAGATTGCTCGACTGTTGGAACGTCTTCATTGTTATGAGACCATGAATAGGGAGATGTCTCAGAGGAACCAGGAAGCAATAGATGTATGTCCTAATTTGTTTGGCTTGCTCCATTTTCCTATCTCATTTATGTCTTTGTTGTCACATTTAGAGATGGCTCGACGTGAGAGACAAAGGACGAGTAGGAGGCATAAATGGATTTGGGGCTCTATTACTACTGTCATTGCACTAGGTACTACAGCAATAGCATGGTCTTATCTCCCAATGGGTAAAGGATCAACATTCGTAGACCGTGATATGGTTCCTGAACATGATAATGCAACCAACTAA 1365 0.4227 MPIFTTIAFDRLIEPRASKHVPTSMSVPKTLERRSSEPTVRKKVPPRPQLKPSLYATPKVTPLPDPPSSFPPSPYIVNHKRRGPRLLKSLSEANAQAKEFHDDENVNGKRPDTVVTSLAGDLQVTFMNRESVKEEHVNGVQDGKLSRSNDCELGKEQRESESGSITNGFHKEKVVALNLERDGEHEDFFDPHDSLSLASYTDGEDNIETERAMKFSTPRWEFFDAWEELFSDGGAQNSLHDVEAELREIRLSLLMEIEKRKKVEESLNNMQNQWERIRKGFSHVGIILPRDLTNIAEDAQLSSNLVDDLCQQVYISRFISNTIGRGIARAEVEIEMEAQLESKNFEIARLLERLHCYETMNREMSQRNQEAIDVCPNLFGLLHFPISFMSLLSHLEMARRERQRTSRRHKWIWGSITTVIALGTTAIAWSYLPMGKGSTFVDRDMVPEHDNATN. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02742 454 Coils Coil 253 273 - -
Seca12g02742 454 MobiDBLite consensus disorder prediction 17 74 - -
Seca12g02742 454 PANTHER BACTERIOPHAGE N4 ADSORPTION B PROTEIN 1 453 - -
Seca12g02742 454 MobiDBLite consensus disorder prediction 59 73 - -
Seca12g02742 454 MobiDBLite consensus disorder prediction 133 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02742 Seca-Chr12 48126461 48129560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02742 - - gmx:100792591 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02742 12 48126461 48129560 Seca12g02742 12 48126461 48129560 ECH
Seca12g02742 12 48126461 48129560 Seca12g02742 12 48126461 48129560 PCT