Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02737 ATGAGTAGGAGGAGTTTTGCCGTGAAAGGAATTGTGGCTTCTGGAGCTTCAGTCATGGCTTCCACTCTGACTGCAGAAGCTGCTGAATCATCATCTCAAGCTTCAGGTTTTGAAAGATTAGCATACAAACCGGAAGGGTACAATTATTGGACTTGGAGGGATCATAAAATACACTATGTAGTGCAAGGAGAAGGCTCTCCTATTGTCCTTATTCATGGTTTTGGGGCCTCTGCATTCCATTGGAGGTACAACATTCCAGAATTGGCTAAGAAACACAAGGTCTATGCCTTAGACTTGCTTGGATTTGGGTGGAGTGACAAAGCTCTTATTGAGTATGATGCCATGGTGTGGAGGGATCAAGTGGTGGATTTCGTGAAGGAAATAGTAAAAGAACCAGCAGTTTTAGTTGGAAATAGCCTTGGAGGATTTACTGCTTTGGTTGCAGCAACTGGGGTGCCCGAGCTTGTCAATGGAGTTGTTTTACTGAATTCTGCAGGACAATTTGGTGATGGAAATAAGGAACAGAAAACTTCTGAAGAAACACCTCTACAAAAGTTTTTCTTAAAACCTTTGAAGGAAGTTTTCCAACGTGTAGTTCTTGGATTTTTATTCTGGCAGGCAAAGCAACCTGCTCGGATTTTGTCAGTCTTAAAAAGTGTGTATATAAATTCTTCCAATGTTGATGACTATCTTGTGGAATCTATAACAAGGCCAGCTGAAGACCCCAATGCCGGAGAAGTTTATTACAGGTTAATGACACGCTTCATGATGAATCAGAGCAAGTACACTCTAGATGCTGTTTTAAGTGAACTCTCTTGTCCATTGCTTTTGCTCTGGGGTGACCTTGACCCATGGGTTGGTCCAGCCAAAGCAAATAGAATCAAAGAGTTCTATCCAAAAACAACTCTTGTAAACTTGCAGGCAGGGCATTGCCCACATGATGAGGTACCAGAGCATGTGAACAAGGCTTTATTGGATTGGTTGACCACCCTCACTCCTGAAACCACTCTCCAAACAGTTTGA 1023 0.4252 MSRRSFAVKGIVASGASVMASTLTAEAAESSSQASGFERLAYKPEGYNYWTWRDHKIHYVVQGEGSPIVLIHGFGASAFHWRYNIPELAKKHKVYALDLLGFGWSDKALIEYDAMVWRDQVVDFVKEIVKEPAVLVGNSLGGFTALVAATGVPELVNGVVLLNSAGQFGDGNKEQKTSEETPLQKFFLKPLKEVFQRVVLGFLFWQAKQPARILSVLKSVYINSSNVDDYLVESITRPAEDPNAGEVYYRLMTRFMMNQSKYTLDAVLSELSCPLLLLWGDLDPWVGPAKANRIKEFYPKTTLVNLQAGHCPHDEVPEHVNKALLDWLTTLTPETTLQTV. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02737 340 Gene3D alpha/beta hydrolase 44 331 IPR029058 -
Seca12g02737 340 SUPERFAMILY alpha/beta-Hydrolases 48 328 IPR029058 -
Seca12g02737 340 Pfam Alpha/beta hydrolase family 68 320 IPR000073 -
Seca12g02737 340 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 6 331 - -
Seca12g02737 340 PRINTS Alpha/beta hydrolase fold signature 135 148 IPR000073 -
Seca12g02737 340 PRINTS Alpha/beta hydrolase fold signature 91 106 IPR000073 -
Seca12g02737 340 PRINTS Alpha/beta hydrolase fold signature 149 162 IPR000073 -
Seca12g02737 340 FunFam Alpha/beta fold hydrolase 45 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02737 Seca-Chr12 48024940 48028843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02737 67 318 Acyl Lipid Metabolism Gene Families AT3G10840 24.013 1.22e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02737 - - aprc:113857506 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02737 12 48024940 48028843 Seca12g02737 12 48024940 48028843 ECH