Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02708 ATGGTGAACCTGGTGGCAGCACAGAGGCCATTGTTGCATGGACTAATGAAGATGGCAGGGATCAGGCCCTACACGGTGGAGATAGAACCAGGGACCGTGATGAGTTTCTGGGTTCCTTCAGAAACCATCACAAAGCCCAAGAAAAAAGACGAAAAGCCCAAAATCATTGCCAAGCCGAACAAGCCCACCGTGGTTCTAGTCCACGGGTTCGCCGCGGAAGGAATCGTGACGTGGCAGTTTCAAGTTGGCGCTTTAACAAAAAAATACTCTGTTTATGTGCCGGATCTTCTATTCTTCGGTGGGTCCACATCGGATAAACCAGAGAGGTCACCAAGTTTTCAAGCGGAGTGTTTAGCAACAGGGTTAAGGAAACTTGGGGTGGAAAAATGCATAGTGGTTGGTTTCAGTTATGGTGGGATGGTGGCTTTTAAGATGGCTGAGATGTACCCTGATATGATCCAAGCTATGGTAATCTCAGGGTCTATTTTGGAAATGACAGATTCAATAAGTGAGAAGACAGTTGAAGAGCTTGGGTTTTCTTCTTCTTCGGAGCTGTTGTTGCCTACCTCTGTTAAGGGTCTTAAGGCTCTTTTGTCTGTTGCTGCTTACAAAAAACTATGGTTCCCTGATCGATTGCACAAAGACTTCCTTGAGGTGATGTTCACAAATAGGAAGGAGCGAGGTGAGTTATTGGAGAGCTTACCAATTAGCAACACAGACCTCAACATCCCAAATTTTCCGCAGAGGATACATCTTCTATGGGGCGAGAATGATCAAATTTTCAAACAGGAGCTTGCGCAGAATATGAAAGAGTAA 816 0.4547 MVNLVAAQRPLLHGLMKMAGIRPYTVEIEPGTVMSFWVPSETITKPKKKDEKPKIIAKPNKPTVVLVHGFAAEGIVTWQFQVGALTKKYSVYVPDLLFFGGSTSDKPERSPSFQAECLATGLRKLGVEKCIVVGFSYGGMVAFKMAEMYPDMIQAMVISGSILEMTDSISEKTVEELGFSSSSELLLPTSVKGLKALLSVAAYKKLWFPDRLHKDFLEVMFTNRKERGELLESLPISNTDLNIPNFPQRIHLLWGENDQIFKQELAQNMKE. 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02708 271 Gene3D alpha/beta hydrolase 54 271 IPR029058 -
Seca12g02708 271 SUPERFAMILY alpha/beta-Hydrolases 59 270 IPR029058 -
Seca12g02708 271 PANTHER SI:DKEY-122A22.2 1 270 - -
Seca12g02708 271 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Seca12g02708 271 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Seca12g02708 271 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Seca12g02708 271 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Seca12g02708 271 Pfam alpha/beta hydrolase fold 62 170 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02708 Seca-Chr12 46765771 46770513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02708 60 157 Acyl Lipid Metabolism Gene Families AT2G26740 29.245 6.22e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02708 - - lja:Lj4g3v0962160.2 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02708 12 46765771 46770513 Seca12g02708 12 46765771 46770513 ECH
Seca12g02708 12 46765771 46770513 Seca12g02708 12 46765771 46770513 PCT