Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02695 ATGTGGCGAAGGAGGTTTAGCAGCAGCAGTGCCAGCATCGCCGCATTGAAGGCCAAGAAATGGGACGCGCTGATTATCGGCGGCGGCCACAACGGCCTGACGGCAGCAGCTTACCTCGCCCGCGGAGGCCTGTCAGTGGCCGTTCTCGAGCGCCGTCACGTCATCGGCGGTGCTGCCGTGACGGAAGAGCTGATTCCGGGCTTCAAGTTTTCTCGGTGCAGTTATCTACAAAGCCTTCTCCGGCCGTCGGTAATCAAGGAACTGGAGTTGGGGAAGCACGGATTGAAGCTTCTTAAGAGGAATCCGTCGTCGTTTACGCCCTGCCTCGACGGACGCTACCTTCTCTTGGGGCCTGACAAGCACTTCAACCATTCTGAGATTTCCAAGTTCTCACAAAAAGACGCCGAGGCTTATCCAAAATATGAGAGTCAGCTTGAGAACTTCTGTAAATTCATGGATCTAGTGCTGGATTCGCCTCCGCCTGAATCTTTGCAACACAAATCGTCTCTTAATGAACAATTGAAGAATAAATTACAGAATTCAGTATTTTGGGCAAGTATTCTGCGGCAGGCATCCTCCTTGGGGCAAAAGGATATGGTGGACTTCATGGACCTTTTGTTGTCCCCAGCTTCTAAAGTTTTGAACAACTGGTTTGAGACAGATGTTCTGAAGGCAACCCTTGCAACAGATGCCGTGATAGGAAGTACAGCCAGTGTCCACACCCCAGGAAGTGGTTATGTTCTGCTACATCATGTGATGGGTGAATCTGATGGAGATCGTGGAATTTGGTCGTATGTATCTCTGTTGCTAGCTTGA 816 0.5061 MWRRRFSSSSASIAALKAKKWDALIIGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSVIKELELGKHGLKLLKRNPSSFTPCLDGRYLLLGPDKHFNHSEISKFSQKDAEAYPKYESQLENFCKFMDLVLDSPPPESLQHKSSLNEQLKNKLQNSVFWASILRQASSLGQKDMVDFMDLLLSPASKVLNNWFETDVLKATLATDAVIGSTASVHTPGSGYVLLHHVMGESDGDRGIWSYVSLLLA. 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02695 271 Gene3D - 20 111 IPR036188 -
Seca12g02695 271 Pfam NAD(P)-binding Rossmann-like domain 25 70 - -
Seca12g02695 271 SUPERFAMILY FAD/NAD(P)-binding domain 19 254 IPR036188 -
Seca12g02695 271 PANTHER PHYTOENE DEHYDROGENASE 3 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02695 Seca-Chr12 46533509 46536280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02695 - - gmx:100781247 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02695 12 46533509 46536280 Seca12g02695 12 46533509 46536280 ECH