Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02692 ATGATAAGAGCAGTGCTAGTGATGAACACGCAGGGGAAGCCTCGTCTCGCCAAATTCTATGAATTTCGGCCCGTGGAGAAGCAACAGGAAGTTATTCGCAATGTGTTTGCAGTCTTATGCAGTAGACCTGAACATGCCAGTAATTTTGTGGATGCCGAGTCCTTCTTTGGCCCGGATGCTCGCCTTGTCTACAAGCACTTTGCAACTTTATACTTCGTGTTTATATTTGATAGTTCTGAAAACGAGCTTGCTATGCTTGACCTGATACAAGTCTTTGTTGAAACACTGGACAAATGCTTCAGAAATGTATGTGAGCTTGATGTCGTATTCAACTATAGTAAGGTTGTATGCTTTGTGCCCTCGATTATGAATCATATATTCCTTATCACAAAATGA 396 0.4167 MIRAVLVMNTQGKPRLAKFYEFRPVEKQQEVIRNVFAVLCSRPEHASNFVDAESFFGPDARLVYKHFATLYFVFIFDSSENELAMLDLIQVFVETLDKCFRNVCELDVVFNYSKVVCFVPSIMNHIFLITK. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02692 131 ProSitePatterns Clathrin adaptor complexes small chain signature. 62 72 IPR000804 GO:0006886|GO:0016192|GO:0030117
Seca12g02692 131 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 123 IPR016635 GO:0015031
Seca12g02692 131 SUPERFAMILY SNARE-like 1 118 IPR011012 -
Seca12g02692 131 PIRSF AP_complex_sigma 1 128 IPR016635 GO:0015031
Seca12g02692 131 Gene3D - 1 128 - -
Seca12g02692 131 Pfam Clathrin adaptor complex small chain 1 122 IPR022775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02692 Seca-Chr12 46523688 46527544 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02692 K12399 - gmx:100306517 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02692 12 46523688 46527544 Seca12g02692 12 46523688 46527544 ECH