Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02683 ATGTTCCTTCTTAGAAGGCAAACCCAGAATCAGCAGGAGAATGGTTCCTCATATCAAGATGCAAAGGTGGCTGAACTCAGGGCTGCTATTGTGAATCTATCTGGGCGTCGATTAAAGTATTGCACAGATGCATGTCTAAGGAGATATTTAGAAGCACGGAACTGGAATGTTGATAAAGCCAAGAAAATGCTGGAGGAAACACTCAAGTGGAGGTCAACTTATAAGCCTGAGGAAATCCGTTGGGCTGAAGTAGCACATGAGGGTGAGACTGGCAAAGTCTCCAGAGCTAACTTTCATGATCGACTTGGGAGGCCCGTGCTTATTATGAGGCCAGGCATGCAGAACACAGCATCACCAGAAAATAATATCAGGCATTTAGTCTATCTATTGGAAAATGCTGTCCTTAATCTTTCTGAAGGCCAAGAGCAAATGTCGTGGTTGATAGACTTCACAGGTTTTTCACTCGGCACAAATATTCCTATTAAAACAGCTCGTGATATTATTCATATTTTACAAAACCACTATCCAGAAAGGCTTGCTATTGCTTTTCTGTATAATCCACCAAGAATATTTCAGGCTTTCTGGAAGGTTTGTTCTCCTTCCCTACAAGTGATCTTTGTTCTGTTCATTGTTGCATGCGTTCATTTAGATTTTCTGATCTTTTGTCATTTATATTTTACTTTTGGTTTAGCAATACTTAGCAAATCCTTCTTTTTTTGCAAGTGTAGTTTGTTCTGTATCACCCTTAACTTTTAG 756 0.3981 MFLLRRQTQNQQENGSSYQDAKVAELRAAIVNLSGRRLKYCTDACLRRYLEARNWNVDKAKKMLEETLKWRSTYKPEEIRWAEVAHEGETGKVSRANFHDRLGRPVLIMRPGMQNTASPENNIRHLVYLLENAVLNLSEGQEQMSWLIDFTGFSLGTNIPIKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKVCSPSLQVIFVLFIVACVHLDFLIFCHLYFTFGLAILSKSFFFCKCSLFCITLNF. 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02683 251 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Seca12g02683 251 SUPERFAMILY CRAL/TRIO domain 82 202 IPR036865 -
Seca12g02683 251 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 203 IPR001251 -
Seca12g02683 251 SMART sec14_4 87 233 IPR001251 -
Seca12g02683 251 SUPERFAMILY CRAL/TRIO N-terminal domain 12 82 IPR036273 -
Seca12g02683 251 CDD SEC14 99 202 IPR001251 -
Seca12g02683 251 PANTHER GH16843P 9 202 - -
Seca12g02683 251 Gene3D - 3 206 IPR036865 -
Seca12g02683 251 Pfam CRAL/TRIO domain 95 202 IPR001251 -
Seca12g02683 251 Pfam CRAL/TRIO, N-terminal domain 42 66 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02683 Seca-Chr12 46402937 46407470 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02683 K26544 - gmx:100800024 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02683 12 46402937 46407470 Seca12g02683 12 46402937 46407470 ECH