Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02652 ATGGCCTATGCAGTTAGAGCAATTAAAGAGGAGCCCAAAGGCTCTATTAATCCCTCAAGGGTCTTAGAGAAGGCTCACTCAAGTACAAAGGCCAAGGGTTCATCAACAGCTTGTATCATTGCCCTTACCAATATGGGACTACATTCTATTAATTTGGGTGACAGTGGTTTCATTGTGGTTAGAGATGGATGCACTATTTTCAGGTCGCCTATTCAACAGCATGGCTTCAATTTTACATATCAATTGCAGAGCGGCAATGGAGGTGATCTACCCAGCTCTGGTGAGCAGGTTTTTAAAATACCAATTGCCCCTGGAGATGTTGTCATTGCTGGAACAGATGGATTGTTTGACAATCTGTACGATGATGAGGTGGCTGCAGTTATTTTACATGCAGTTAAAGCTGGACTGGAACCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCACTGGACAGGAATAGGCAGACACCATTCTCTACTGCTGCTCAAGAGGCTGGGTTCCGTTATTATGGTGGGAAACTTGATGACATAACAGTTGTCGTGTCGTACATAACCAGCTCAGTAAGTTTTTTGCCATCATAA 594 0.4444 MAYAVRAIKEEPKGSINPSRVLEKAHSSTKAKGSSTACIIALTNMGLHSINLGDSGFIVVRDGCTIFRSPIQQHGFNFTYQLQSGNGGDLPSSGEQVFKIPIAPGDVVIAGTDGLFDNLYDDEVAAVILHAVKAGLEPQVTAQKIAALARQRALDRNRQTPFSTAAQEAGFRYYGGKLDDITVVVSYITSSVSFLPS. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02652 197 Gene3D - 17 190 IPR036457 -
Seca12g02652 197 Pfam Stage II sporulation protein E (SpoIIE) 7 186 IPR001932 -
Seca12g02652 197 ProSiteProfiles PPM-type phosphatase domain profile. 1 188 IPR001932 -
Seca12g02652 197 SUPERFAMILY PP2C-like 17 185 IPR036457 -
Seca12g02652 197 PANTHER PROTEIN PHOSPHATASE 2C 10 191 IPR039123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02652 Seca-Chr12 45007177 45010913 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02652 K17508 - gmx:100802359 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02652 12 45007177 45010913 Seca12g02652 12 45007177 45010913 ECH
Seca12g02652 12 45007177 45010913 Seca12g02652 12 45007177 45010913 PCT