Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02643 ATGGGAGGGCAATCCAGCAAGATGATTAGTGTTGATACCCCAACATCTGTCAAAATGGGTACCCATTCCTTGTATGCAGCTGATTTGAGTTCCTATGAAGCTGCATGTGTGAAAGATCCAAACTTGCAATCTTTTGATGCCACCATTCATGAGCACACCAACAGGGTGATTAGTTCCCTTGCTCATGGGGTTGAGGTTCGTTCCTTATCTTTTAATTCACTGAGAGAAGTGACTGATAGTCTTCTTGAGATGAACCAGGAAGTAGTCAAAGTTATTTTGGATTGCAAGAGTGATATATGGGGGAACAAGGACTTGTTCTCCTTGGTGAATGACTATTTTGATAATAGTCTCCAGACATTGGAATTCTGTAATTCTCTTGAGAAATGCTTGAGAAGAGCACGTGAAAACCAGATGATAGTCAAGTCAGTAATTACCTATTTTGAGGAAGAGGTGGGAAATGGGGTTGAAGAGGGGGCATATGTGAAGACATTGCAAGAGCTCAAGAATTTTAAGGATGCTGGGGACCCTTTTACAGAAGAGTTTTATATGTTGTTTCAATCAATTTATACACAGCAGGCATCGATGTTGCGGAAATTGCAAATCAGAAAGAGAAAGCTTGATAAGAAATTGAAATCCCTCAAGACATGGAAGAGGGTGTCAAATGCCATATTTGTAGCTGCTTTTGTGTCTGTGTTGATTTTCTCAGTAGTAGCAGCTTCTGTGGCTGCACCTCCTGTTGTAACAGCTATAGCTGCTGCATTGGCTGTTCCAATAGGGTCAGTAGGAAAATGGTGTAACTCACTTTTTAAGGGATATGAGAAAGCTCTAAAGGGACAACGGGAAGTAATCAGTTCAATGCAGGTTGGTACTTACATTTCATTGAAGGACTTGGACAACATTCGGGTACTTACCAACAAATTAGAAGTACAGCTTGAATCATTGTTGCAGAATGCTGATTTTGCTCTAAGAAACGAGGATGTTATAAAGCTTGCAATTGAAGAGATTAAGAAGAAAATAGAAACATTTTCAGAGACCATGGAGACTTTGAGTGAACATGCTGATAAATGTAGTCGACAGATAAGGAGAGCAAGGACTGTGGTAATACAAAATATAATTAAAAGACCTGATTGA 1131 0.397 MGGQSSKMISVDTPTSVKMGTHSLYAADLSSYEAACVKDPNLQSFDATIHEHTNRVISSLAHGVEVRSLSFNSLREVTDSLLEMNQEVVKVILDCKSDIWGNKDLFSLVNDYFDNSLQTLEFCNSLEKCLRRARENQMIVKSVITYFEEEVGNGVEEGAYVKTLQELKNFKDAGDPFTEEFYMLFQSIYTQQASMLRKLQIRKRKLDKKLKSLKTWKRVSNAIFVAAFVSVLIFSVVAASVAAPPVVTAIAAALAVPIGSVGKWCNSLFKGYEKALKGQREVISSMQVGTYISLKDLDNIRVLTNKLEVQLESLLQNADFALRNEDVIKLAIEEIKKKIETFSETMETLSEHADKCSRQIRRARTVVIQNIIKRPD. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02643 376 Coils Coil 332 352 - -
Seca12g02643 376 PANTHER UPF0496 PROTEIN 3-RELATED 25 373 IPR007749 -
Seca12g02643 376 Pfam Protein of unknown function (DUF677) 42 371 IPR007749 -
Seca12g02643 376 Coils Coil 297 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02643 Seca-Chr12 44680979 44682109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02643 - - gmx:100782901 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02643 12 44680979 44682109 Seca12g02643 12 44680979 44682109 ECH