Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02640 ATGGCGTTTAAAAAAACCCTTGCAGAGCGCCTCTTCAGCATCACCAAAATCTCCTCGCAAACCCTCTCCAATTGTCGCATTTCCTCTTCTTCCGTTCAATCTCGGATCCCTTCTCCCACCGCCGCGAAGCGCGACATTGCTCCAGATCCCGGAGATGATGGCATATTCCGGAGGTTCCTCCACCGGAGGGCTGTTTTCCAACCGGAGCTCCGGTCACCGCCGGCTTCTGCCGACAACCTCCTCCAGAAGCTCAGAGAGATGGACATTGCGAGAAGCCGAATCCGATTGGAAGGCCTGAGTCCACCAGAGACGGAGGAGAAGGGAGCAGCGGCGACGGTTGAAGATGTGAGGAAGTTGTTGAGAGCAACGCAGTTAGAAACTATAAAATCGAAGCTGCGGAAGATTCCAGAGAATTGCATAAGTTATTCGGAGTTGATTCAAATATGTGCAGAGTATTGTTCGAATCAAGATCAAGCGAAGAAGATTGCGAAGATGCTGGATGATTCAGCAACAGTAATTATATTGGGAGATCATGTGTTTCTCAAGCCTGAACAGCCAAACTCTCTCAAATTTGTGATACAGGTAGCAAAAACCATTCAGGCTCTACTCCCTGTACCAGGAGCCAAGGCAAATGACTCAGTACGAAAAGAACTTGAAGAAATGGAGAAAGAGAAAGCAGCCATTGACCACAAAGCTGACACCTTGGTTCGCCGTGAACTCTGGGGTGGATTGGGTTTTCTGGTGGTGCAAACAGCAGCATTCATGAGGCTCACATTTTGGGAACTTTCATGGGATGTAATGGAGCCCATATGCTTCTATGTGACCTCTATGTATTTCATGGCCGGCTATACGTTCTTCCTGAGGACCTCAAAAGAACCTTGCTTTGAAGGTTTCTACCAAAGCCGTTTCAGCACCAAGCAGAAGCGCTTGATGAAACTTCACAATTTTGACATTGCAAGGTATAATGAGCTCAGGGATGCTTCACCACCATCACCCTCTTCCGAGTTGGATTCATCCATTGGTTACCCATTGGACAAATTTCATAAAAATCTATGA 1056 0.4744 MAFKKTLAERLFSITKISSQTLSNCRISSSSVQSRIPSPTAAKRDIAPDPGDDGIFRRFLHRRAVFQPELRSPPASADNLLQKLREMDIARSRIRLEGLSPPETEEKGAAATVEDVRKLLRATQLETIKSKLRKIPENCISYSELIQICAEYCSNQDQAKKIAKMLDDSATVIILGDHVFLKPEQPNSLKFVIQVAKTIQALLPVPGAKANDSVRKELEEMEKEKAAIDHKADTLVRRELWGGLGFLVVQTAAFMRLTFWELSWDVMEPICFYVTSMYFMAGYTFFLRTSKEPCFEGFYQSRFSTKQKRLMKLHNFDIARYNELRDASPPSPSSELDSSIGYPLDKFHKNL. 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02640 351 Pfam Mitochondrial calcium uniporter 156 324 IPR006769 -
Seca12g02640 351 Coils Coil 211 238 - -
Seca12g02640 351 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 34 333 IPR039055 GO:0051560
Seca12g02640 351 MobiDBLite consensus disorder prediction 28 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02640 Seca-Chr12 44459010 44463745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02640 K20858 - gmx:100809065 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02640 12 44459010 44463745 Seca12g02640 12 44459010 44463745 ECH