Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02617 ATGGCAGAAATTAGGCTTACCAGGGTGGAGCAAGGCCAAACCAAGATTAAAAATGTTCCAATAGCTGTTACCCCAGAAGGGTTTTGGTGTTGTCCTTCTCCTGTTGTGTTTCAGAAAAGCATCAAGCCTCAAAATCCTCTGAATAAACCCAAACCCTCTTCACCCCCAACAAAAACCAATGTCCAGAAAAAGCCAGTGCCTTTGAGTGAGAGAAGAGCTGCTGCACCTGCCCCATCAAGATTGTTGCTTTCTGATGATCAACAACAATGTACTAGTGTTTCTGAAAGGCCTCCTCCAGCTAGCACATCTGTGGCTGCAGAGAGAGCACCTAGACCCAAAATTGAAACTATGCCAAGAAAGGTAGCTATTGAGTTTGGTGAACCTGGAACATGTGATATGAAGGTGGTTTTATTAGGCAAGCAGGGATTTTCTGTAAAGTTAAGTGTGCACAGGGAGGTTTTGAAAGAGAAGAGTAGTTTCTTTTCTGATAAACTTTCTGAACAACCGGATTTGTCTTGTGTCCAAATTGGTGATTGTGAGGATGTTGAAATATATGTTGAAACTGTTGGTCTGATGTACTGCAAGGAAATGAAGCAACGGCTCATGAAGCAAAATGTCTCTCGTATTCTCCGAATACTCAAGGTTGCAGAATTCCTTGGCTTCAGCTCATGTATCCAATCATGTTTGGAGTACTTGGAGGCAGTCCCTTGGGTTGGAGAAGAAGAAGAAGAAAAGGTGGTCTCAACTGTACTACAACTCCAAGGGGAAGGAATTGGGGTCAACCCTGTGCTGAAACGAGTTTCTTCTGGTATTTCTAATGGCCCAAAAGACACTATTTCCCACATTATAGAACTTGTTCTCAAAAGCAATGAGGAAAGAGGTCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCCTTAGGGAGAATAACAATATTCCAAGCTATGCACGTTCAGCTGACATCTGCATCGAGATGATTTATAGATCATGCAGAAGCTGCTTGGATTCACTATTGTCTCTGTTCAAGCAGGCTGCAGAACCACCCTCCACAGACAAACCAAGTGATGATAGAGATTCCATAGTAAAGCATATAGCTCTTGAAGCTGATAACCTATCATGGTTGCTTGAGATTTTAGTTGACAAGCAAGCTGCTGATGAGTTTGCATTGATGTGGGCAAACCAGCAAGAACTGGCTGTCCTACATGCAAAGCTGCCAATTGTATCTCGTTATCACGTGAGCTGCATTTCCGGAAGACTCTATGTTAGCATTGGAAGAGGGGAGTTGTTGCCATCAAAGGACACGCGGCAGTTGTTATTACAGACATGGCTGCAGCCTCTAATGAATGACTACAACTGGTTGCAGCATGGATGCAGGTCATTTGATAGGAAACTTGTGGAGGAAGGAATTGGGAGGACAATTCTCACCTTGCCTCTGGAGGATCAACAGAGTATTTTGCTTTCTTGGTTGGGAAGTTTCTTGAAAACTGGTGATAGTTGTCCCAATCTTCAGAGAGCTTTTGAGGTATGGTGGAGGAGAACTTTCATTAGACCATATGTGGAAAATCAAGGTAATTCCATGTCAGAGATGTTGTCAAAGCAGCATGAATGA 1608 0.4316 MAEIRLTRVEQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSIKPQNPLNKPKPSSPPTKTNVQKKPVPLSERRAAAPAPSRLLLSDDQQQCTSVSERPPPASTSVAAERAPRPKIETMPRKVAIEFGEPGTCDMKVVLLGKQGFSVKLSVHREVLKEKSSFFSDKLSEQPDLSCVQIGDCEDVEIYVETVGLMYCKEMKQRLMKQNVSRILRILKVAEFLGFSSCIQSCLEYLEAVPWVGEEEEEKVVSTVLQLQGEGIGVNPVLKRVSSGISNGPKDTISHIIELVLKSNEERGRREMKSIVLKLLRENNNIPSYARSADICIEMIYRSCRSCLDSLLSLFKQAAEPPSTDKPSDDRDSIVKHIALEADNLSWLLEILVDKQAADEFALMWANQQELAVLHAKLPIVSRYHVSCISGRLYVSIGRGELLPSKDTRQLLLQTWLQPLMNDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWLGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENQGNSMSEMLSKQHE. 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02617 535 Gene3D Potassium Channel Kv1.1; Chain A 125 253 IPR011333 -
Seca12g02617 535 MobiDBLite consensus disorder prediction 82 99 - -
Seca12g02617 535 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 121 523 IPR038920 -
Seca12g02617 535 MobiDBLite consensus disorder prediction 40 110 - -
Seca12g02617 535 SUPERFAMILY POZ domain 130 233 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02617 Seca-Chr12 43537053 43540914 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02617 - - gmx:100789609 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02617 12 43537053 43540914 Seca12g02617 12 43537053 43540914 ECH