Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02612 ATGTTCCTGGGCATGGGGCTTGAAGGTCTGATTCCAAGGCACAAGCGTTCAAAGAGCTTTCCTGATAAGAAAACAGTGGAGGAGGATAATCCAGATAACCTTGAGGCCTCAGATCGAACCAAGCTGGATTTAGGGTACCTCACTGAATGCAGTGAAGCTAGGAGAAAACAAACCCCTACACATGATGTTCAACATACTCTGAAGCAAGAGATTCTACAATTAGAGAAAAGACTGCAAGACCAATTTGAGGTCAGATGCACATTAGAAAAGGCACTTGGATACAGACCTACATCTCTTGTTAATCCAAATGACACGATAATTCCAAAGCCAACCACAGAATTAATTAAAGAAATTGCAGTGTTAGAGTTAGAAGTTGTGTATTTGGAACAGCATCTTCTCTCCTTGTACCGTAAAGCATTTGATCAACAATTAACCTCTGTGGCTCCATCCACCAAGGAGGAAAGAGTAAAGTCTCCTCTAACTACACCTAGAGCAAGATTTGTTGACACTTCGCCTGAGGTCTTGACCAAAAGAGGATGTTCTGCAGTACAATCTATTGACCATGAACTGGATACTCTGCCAAAAGAATATAATGGATGTGAACTTGAGACTCCGGAGAAAGGATACACTGTACATCAACCAGAAGGAAAGCATTTAGACTCTGGTGTATATCGTTGCCACTCCTCATTATCTCAGTGTTCAACATTTACAACAAGAGTATCTCCTCCAGCAGAAGAGTCAGCTGAATCTCTGCGTGCCTGTCATTCCCAACCCTTGTCCATGATGGAGTTTGCCCAAAATGTAGATGCTTCACCAAGAATAATTAGTCTGGCAGAACATCTCGGTACCCGTATATCTGATCATATTCCAGCTACAGCCAATAGGCTTTCTGAGGATATGGTTAAATGTATATCATCTATATACTGCAAACTTGCAGAGCCACCTATGACAAATCCTGGCCTTTCATCTCCCAGTTCATCCTTGTCTTCAACAAGTGCCTTCTCTATTGGAGATCAAGGGGACATGTGGAGTCCAGGGTTCAGGAACAATTCCTCTTTTGATGTACGGTTAGACAATCCTTTTCATGTGGAAGGACTCAAGGAGTTCAGTGGACCATACAGCACCATGGTTGAGATATCATGGATTTATAAAGAGAATCAGAAATTGGGTGATACAGAGCAGTTGCTCCAGAATTTCAGGTCAATTATTTGTCAATTAGAAGAAGTAGATCCTGGGAAGTTGACACATGAGGAGAAGTTAGCTTTCTGGATCAACGTACACAATGCTTTGGTGATGCATGCATTTTTGGCTTATGGAATTCCACAAAACAATGTGAAAAGAGCCTTTCTTCTGTTGAAGGCTGCATATAATATTGGGGGTCATACAGTCAGTGCAGACACAATACAGAGTTCCATACTCGGGTGCCGGATGCCTCGTCCTGGACAGTGGTTCCGCTTGTTCTTTTCTCCAAGGACAAAATTCAAAGCTGGAGATGGACGACAAGCTTATGCAATTGAACATCCTGAGCCTCTTCTACACTTTGCACTCTGTTCAGGGAACCACTCTGATCCAGCGGTACGTGTATATACACCCAAGAGAGTGTTTCAAGAACTAGAAGTTGCAAAGGAAGAGTACATTAGAGCTACCTTTGGGGTACGCAAGGACCAGAAAATACTTCTACCCAAGATTGTAGAGTCATTCACCAAGGACTCAAGTTTGCCCCATGATGGTATTATGGAGATGATCCAACAGTCTCTTCCTGAATCTCTAAGAAAGTGTGTTAAGAAATGTCACCTTGCAAAATCTGGGAAGAGCATAGAATGGATTCCACACAACTTCACTTTTAGATATCTCATACCTAAGGAGCTGGTAAAATAA 1878 0.4228 MFLGMGLEGLIPRHKRSKSFPDKKTVEEDNPDNLEASDRTKLDLGYLTECSEARRKQTPTHDVQHTLKQEILQLEKRLQDQFEVRCTLEKALGYRPTSLVNPNDTIIPKPTTELIKEIAVLELEVVYLEQHLLSLYRKAFDQQLTSVAPSTKEERVKSPLTTPRARFVDTSPEVLTKRGCSAVQSIDHELDTLPKEYNGCELETPEKGYTVHQPEGKHLDSGVYRCHSSLSQCSTFTTRVSPPAEESAESLRACHSQPLSMMEFAQNVDASPRIISLAEHLGTRISDHIPATANRLSEDMVKCISSIYCKLAEPPMTNPGLSSPSSSLSSTSAFSIGDQGDMWSPGFRNNSSFDVRLDNPFHVEGLKEFSGPYSTMVEISWIYKENQKLGDTEQLLQNFRSIICQLEEVDPGKLTHEEKLAFWINVHNALVMHAFLAYGIPQNNVKRAFLLLKAAYNIGGHTVSADTIQSSILGCRMPRPGQWFRLFFSPRTKFKAGDGRQAYAIEHPEPLLHFALCSGNHSDPAVRVYTPKRVFQELEVAKEEYIRATFGVRKDQKILLPKIVESFTKDSSLPHDGIMEMIQQSLPESLRKCVKKCHLAKSGKSIEWIPHNFTFRYLIPKELVK. 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02612 625 PANTHER UNCHARACTERIZED 43 623 - -
Seca12g02612 625 Pfam Protein of unknown function, DUF547 413 546 IPR006869 -
Seca12g02612 625 Pfam Leucine-zipper of ternary complex factor MIP1 61 142 IPR025757 -
Seca12g02612 625 MobiDBLite consensus disorder prediction 14 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02612 Seca-Chr12 43242927 43248755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02612 - - gmx:100816025 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02612 12 43242927 43248755 Seca12g02612 12 43242927 43248755 ECH
Seca12g02612 12 43242927 43248755 Seca12g02612 12 43242927 43248755 PCT