Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02609 ATGGGTAATTGCAGCTCTTTCGATTCGACGCAGGTGGAGGAAGAGACGGCGAAGGTTGTCGTGCACGACGGTAGGCTACAGGAATTCTCGTACCCGGTTAAGGTTTCGTACCTTTTGCAATTGTTCCCTGCGTGTTTCATATGCGATTCTGATGAGATTGGCTTCGACGACGTCGTCACGGCTATACACGAAGACGAGGTGTTGAGACCTGGCCAGCTGTATTTCGCTCTGCCATTGACGCGTTTGAAACGACCTTTGCCGGCGGCGGAGATAGCGGCGTTGGCGGTGAAAGCCAGCGCTGCGCTCACAAAATGTGGTGGTGATGAGAAATGTCGCCTTCGCCGGAAAAAGATTGTGTTGTTCTCCGGCGCCGAAGGGAACGCTAAGCCTTGCCGGCGAGTGGCGCCGGAAGCTGGTGGTGCCGGCGTTGCTGTTGATAAGATGAGGAGAGAAAGGAGGAGGAGCGGGGAAAAGTTTGCGGCGGTGTTGAGTTCCATACCGGAGTAG 507 0.5523 MGNCSSFDSTQVEEETAKVVVHDGRLQEFSYPVKVSYLLQLFPACFICDSDEIGFDDVVTAIHEDEVLRPGQLYFALPLTRLKRPLPAAEIAALAVKASAALTKCGGDEKCRLRRKKIVLFSGAEGNAKPCRRVAPEAGGAGVAVDKMRRERRRSGEKFAAVLSSIPE. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02609 168 Pfam PADRE domain 1 168 IPR025322 -
Seca12g02609 168 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02609 Seca-Chr12 42881974 42882480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02609 - - gmx:100790666 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02609 12 42881974 42882480 Seca12g02609 12 42881974 42882480 ECH
Seca12g02609 12 42881974 42882480 Seca12g02609 12 42881974 42882480 PCT