Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02608 ATGCATGCTTTTCCAGTTTCAAATGTTGCATTGGCAATGACTTGGAGTTCCTTTCTAGGTTATCTTCAATGCTTATGCCTCACTTGGAGATCTTTACATGTTATCTTTATGTCGTTCCACAGCTTTCTGGTAACAGTCATGGGTTTGGTGATTTCCTGGAGCATAACACTGTTGGTTGTAGATGCATATTCCGTCTTTGTAAAATGTTTACCGCATCAAAGAAGACTCATATTGATCATCATTTTGGGAGACATGGTTTTGTCATATCTCGCACTAGCTGCAGCATGTTCAACAGCCAGTGTCACAGATCTCTTGCTTGATGCAGATGAGTCCTATTGCCCAGCAAAGTTATGTGGTAGATATCAATTATCTGCTTCTATGGCTTTCTTGGCATGGTTTCTTTCATCAGCTTCCTGTCTTTTTAATTTTTGGCTTTTGCCTTCTCTGTAA 450 0.3978 MHAFPVSNVALAMTWSSFLGYLQCLCLTWRSLHVIFMSFHSFLVTVMGLVISWSITLLVVDAYSVFVKCLPHQRRLILIIILGDMVLSYLALAAACSTASVTDLLLDADESYCPAKLCGRYQLSASMAFLAWFLSSASCLFNFWLLPSL. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02608 149 PANTHER CASP-LIKE PROTEIN 5B3 38 148 IPR045009 -
Seca12g02608 149 Pfam Casparian strip membrane protein domain 41 134 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02608 Seca-Chr12 42819068 42820042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02608 - - aip:107646903 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02608 12 42819068 42820042 Seca12g02608 12 42819068 42820042 ECH