Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02532 ATGGCGCAGTGGTGGCGCTCCGCCGCCGGCCACCTCCGAACGGTGGCGGCGAGCCGTTTGTCCTTATCAGGATTTCGGCGCAGTCATTACCACACGATCCAAGCTATCCCAAGAGAGTGTAGTGGTAATAAAGTCTCGGCCAGGGACAGAATGCAAGGTCGAATACCGGCCGTCGTTTTCTTCCAGAACCTTCTGGACAAAAACTCCGACGTCCGATCGGCGTCGAAAAAGCATTTGCTCACCGTCGAGAAGAAGCAGATTAAGGCCATACTCAACTCCGTCAACGATCCTTTCTTCTGCTCCACCCGTTTTCCGCTCCAGATCCGTGCTGGATCCGGATCCTCTCATTTGCTCGAATCCGGAACCGTGCTACCTATCAAGATTCATAGGGACCAAGAGAGTGGGCAGATTTTGAATTTGGTCTTTGTTTGGGCCGAAGACGGAACGGAATTGAAGGTGGATGTGCCTGTTGTTTTCAAAGGGGAAGATGTTTGTCCTGGTCTCCAGAAAGGGGGATTTTTGAATAAGATCAGAACTAGTTTAAAGTATCTTTGTCCGTCTGAGCATATTCCTTCAAAAATCGAGGTGGATGTGAGCAATCTAGATATTGAAGATAGGATATTCATGCGTGATGTTGAGGTTCACCCATCCCTGAAGCTTCTGAGTAAGAATGAAAACATGCCCATATGTAAAATAGTTCCAACAAGTTTGGGAAACCAAGCACCTGTTGGTGAGTGA 738 0.4851 MAQWWRSAAGHLRTVAASRLSLSGFRRSHYHTIQAIPRECSGNKVSARDRMQGRIPAVVFFQNLLDKNSDVRSASKKHLLTVEKKQIKAILNSVNDPFFCSTRFPLQIRAGSGSSHLLESGTVLPIKIHRDQESGQILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGFLNKIRTSLKYLCPSEHIPSKIEVDVSNLDIEDRIFMRDVEVHPSLKLLSKNENMPICKIVPTSLGNQAPVGE. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02532 245 Gene3D Ribosomal protein L25, beta domain 148 227 IPR037121 -
Seca12g02532 245 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 25 235 - -
Seca12g02532 245 FunFam Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein 148 235 - -
Seca12g02532 245 Pfam Ribosomal protein TL5, C-terminal domain 151 235 IPR020057 -
Seca12g02532 245 SUPERFAMILY Ribosomal protein L25-like 30 237 IPR011035 GO:0006412
Seca12g02532 245 CDD Ribosomal_L25_TL5_CTC 32 142 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02532 Seca-Chr12 39909636 39913599 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02532 K02897 - gmx:100802599 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02532 12 39909636 39913599 Seca12g02532 12 39909636 39913599 ECH