Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02389 ATGAAGAATACAAACAACAACACAAAATTCATCCTCCTTCACCCATATATCCAGAAACAAGGAAGCTCTAATCGATTATGGCTTCTAGCTTTCATATCAATTCTCACTCTTGCTTTCCTTGTCACACTCATTTACACAAGAGAATCCACCTTCATCACCACTTCAACTTCCTCTGTCATTTCCACCTCCCCTGTTTCTGGTTTAACCAATGCCCCTTTACCAGCCACAGTAATCAACACTCTCCTCCACTATGCCTCAAAATCCAATGACACCTTCCACATGCCTCACTCAGACCTCAAACCCATTTCAGATGTGCTCAGAAAGTGCTCATCCCCATGCAATTTCCTCATCTTTGGCCTCACACACGAGACCCTCCTCTGGAAAGCCCTGAATCACAACGGCAGAACAGTGTTCATTGATGAAAACCGCTACTACGCTGCATATATAGAGGAAAAGCACCCAGAAATTGATGCCTATGATGTGCAATACACAACCAAAAGAAGTGAGATGAAAGAGCTCATAGCTTCAGCTAAAGAACAAGTAGCAAATGAGTGTAAGCCAGTGCAGAATCTGCTATTCTCAGATTGCAAACTTGGACTCAATGACTTACCAAATCATGTGTATGAGGTTGATTGGGATGTTATATTGGTGGATGGACCACGTGGGGATTGGCCTGATGCTCCGGGAAGAATGTCGGCGATCTTCACCGCCGGCGTGTTGGCTAGAAGCAAAAAGGGTGGGAACCCAAAGACTCATGTGTTCTTGCATGATTTCTCTGGAGAAGTGCAACAGGTTTGTGGGAATGAGTTTTTGTGTAAAGAGAATTTGTTGGAAGCAAGTGAGAGTTTGGGACATTATGTGTTGGAAAGGATGGATGAGAATAGTGTTCAGTATTGCAAGAATAGTTCATCTTCTTCAGGGTCAGGGTCTTCTTCTTCTTCATCCACTTAG 951 0.4364 MKNTNNNTKFILLHPYIQKQGSSNRLWLLAFISILTLAFLVTLIYTRESTFITTSTSSVISTSPVSGLTNAPLPATVINTLLHYASKSNDTFHMPHSDLKPISDVLRKCSSPCNFLIFGLTHETLLWKALNHNGRTVFIDENRYYAAYIEEKHPEIDAYDVQYTTKRSEMKELIASAKEQVANECKPVQNLLFSDCKLGLNDLPNHVYEVDWDVILVDGPRGDWPDAPGRMSAIFTAGVLARSKKGGNPKTHVFLHDFSGEVQQVCGNEFLCKENLLEASESLGHYVLERMDENSVQYCKNSSSSSGSGSSSSSST. 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02389 316 PANTHER OS11G0490100 PROTEIN 12 300 IPR006514 GO:0045492
Seca12g02389 316 NCBIfam TIGR01627 domain 73 299 IPR006514 GO:0045492
Seca12g02389 316 Pfam Polysaccharide biosynthesis 99 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02389 Seca-Chr12 34406322 34407272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02389 - - gmx:100790865 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02389 12 34406322 34407272 Seca12g02389 12 34406322 34407272 ECH
Seca12g02389 12 34406322 34407272 Seca12g02389 12 34406322 34407272 PCT