Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02154 ATGATATTAATGAAATGCATTATAAAATGGTTATTTTGCAGGGTAACAATTGGCACTTGGAATGTTGCTGGAAGACTTCCATGTAGTGATCTTGAAATTGAGGACTGGCTTTGTACCAATGAACCAGCAGATATTTACATTATTGGTTTCCAAGAGGTAGTCCCATTGAATGCTGGAAATGTACTGGGAGCAGAGGATAATACACCCATCCCGAAATGGGAGGCAATCATTCGAAGAACTCTAAACAAATCTGATGAACCTGAAAGTAAACACAAAAGCTACAGTGCCCCTACTTCTCCAGTTCTAAGAACTTCTGCCTCTGCTGATGTTCTAGCAGACAGTATAGATGTTAGTCCACTAGATATGATGAACGAGGAGTTGTATTTAGGAGATTCTGACAATGATGATCTAGAACAGGAGGAAGAGAAAAACATAATTGGTATAAGAAAGAATTTGCAGTTGAGGAGAATATATGGCATTGATTTTAAGACTGCTACACTTGACTGGCCTGAACGTCCATTAGATGCAATCCCCCATGTTGATTCTAGTCCACAATTGCGGAGAGTACTAAGCAGCTCAGCAATTGGCTTTAACTGGACAGAAAATGCTTTAATGTATGGTGGTGGAATGAAACGGTCACACCATAGTTCTGGAAATTTGGGTTTGTTCTGGAAAGAGAAGCAAGTGGTGCCTCAAGTATTTGATTCCCTTGCTGATATATCTGACATGTTATCTGATGAGGAAGATGATACTTTTTCTGAATTACCAAATAGCAAAGATGCTAATGGAATAGGTACTGTGAAATCACATCCTAAGTATGTCCGGATTGTCAGCAAGCAGATGGTAGGAATATATGTGTCTGTTTGGGTGCAAAGGAGGTTGAGAAGGCACATTAACAATTTGAAAGTTTCTCCAGTTGGAATTGGTCTTATGGGCTACATGGGAAACAAGGGATCTGTTTCAATCAGCATGTCTCTCTTTCAGTCACGTTTGTGTTTTGTTTGTTCCCATCTGACTTCTGGTCAGAAGGATGGGGCAGAACAAAGACGAAACTCAGATGTTCATGAAATTATACGACGCACTCGTTTCTCATCCGTCTTTGATACAGATCAACCACAGACAATCCCATCTCATGATCAGATTTTCTGGTTTGGGGATTTGAATTATCGTATCAATATGTCGGATGTTGAGGTTCGAAAGCTAGTAGCTCTAAAGAAGTGGAATGAACTGATGAATTACGATCAGCTAAGCAATGAATTACGTAGAGGACATGTATTTGATGGATGGAAAGAAGGGTTGATAAACTTCCCACCTACTTATAAGTATGGATTTAATTCTGATAAATATGTTGGTGAGAACCCAAAAGAAGGGGAGAAAAAGAGATCTCCAGCCTGGTGTGATCGTATATTGTGGCTAGGAAAAGGAATAAAGCAACTTCGGTATAGGCGTGCAGAAAATAAGCTCTCAGATCATCGACCAGTTAGTTCAATCTTCTCTGTTGAAGTTGAAGTATTTGACCACCGCAAGCTGCAACGAGCTCTCAGTTTCACAAATGCAGCAGTACATCCAGAGGTTTTCCTTAAACAAGATGGGGACTTGCCATATTAG 1608 0.3999 MILMKCIIKWLFCRVTIGTWNVAGRLPCSDLEIEDWLCTNEPADIYIIGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRTLNKSDEPESKHKSYSAPTSPVLRTSASADVLADSIDVSPLDMMNEELYLGDSDNDDLEQEEEKNIIGIRKNLQLRRIYGIDFKTATLDWPERPLDAIPHVDSSPQLRRVLSSSAIGFNWTENALMYGGGMKRSHHSSGNLGLFWKEKQVVPQVFDSLADISDMLSDEEDDTFSELPNSKDANGIGTVKSHPKYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGIGLMGYMGNKGSVSISMSLFQSRLCFVCSHLTSGQKDGAEQRRNSDVHEIIRRTRFSSVFDTDQPQTIPSHDQIFWFGDLNYRINMSDVEVRKLVALKKWNELMNYDQLSNELRRGHVFDGWKEGLINFPPTYKYGFNSDKYVGENPKEGEKKRSPAWCDRILWLGKGIKQLRYRRAENKLSDHRPVSSIFSVEVEVFDHRKLQRALSFTNAAVHPEVFLKQDGDLPY. 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02154 535 Gene3D Endonuclease/exonuclease/phosphatase 7 102 IPR036691 -
Seca12g02154 535 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 15 520 IPR045849 GO:0004445
Seca12g02154 535 SMART i5p_5 209 506 IPR000300 GO:0016791|GO:0046856
Seca12g02154 535 FunFam Type I inositol polyphosphate 5-phosphatase 2 199 524 - -
Seca12g02154 535 SUPERFAMILY DNase I-like 14 516 IPR036691 -
Seca12g02154 535 Gene3D Endonuclease/exonuclease/phosphatase 235 525 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02154 Seca-Chr12 27554641 27563095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02154 266 506 Acyl Lipid Metabolism Gene Families AT1G65580 29.965 2.66e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02154 K24221 - gmx:100807214 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02154 12 27554641 27563095 Seca12g02154 12 27554641 27563095 PCT