Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02149 ATGGCAGAGTTACCAGGGTATTTTCGTTACTGCTTGCACACAGGGAAACTTCTCCTTCTGGCAATTTTGGTCTCCGGAGGAATTGTTTTGCAAATTCTGGTTAGTATTATTGTTTTCCCTCTCCTTGTTGGCAAGCAAAATTGTCACTGTTTACTTACTTCTGTTCTATGTGGCAGGCATGTGCCCTGTATGATAATTGCGATAACATATGTGCTTCTTCCCATGCCTTTGCTGTTCTTTGCTGGATCTGAACGTTCTTCTTTATTTTCTGAATCAGATAACAGTTGGGTGAATGCAACCAAGTTCTTGACTGGGGCCTCAGCTATTGGAAGCATTGCCATTCCAGCCATATTAAAGCATTCTGGTGTTATTGGCTGGGGAGCCCTTGCAATGGAATTCTCTTCCTTCTTTGTGTTTGTATTAGCCATAATGTGTTACATACGCATGAGTGATGAAGATGATTACAGTATTATTTGA 477 0.4109 MAELPGYFRYCLHTGKLLLLAILVSGGIVLQILVSIIVFPLLVGKQNCHCLLTSVLCGRHVPCMIIAITYVLLPMPLLFFAGSERSSLFSESDNSWVNATKFLTGASAIGSIAIPAILKHSGVIGWGALAMEFSSFFVFVLAIMCYIRMSDEDDYSII. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02149 158 PANTHER LEPTIN RECEPTOR-RELATED 16 155 IPR007262 -
Seca12g02149 158 Pfam Vacuolar protein sorting 55 19 154 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02149 Seca-Chr12 27397647 27398430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02149 1 154 EF-hand Containing Proteins AT1G32410 55.844 4.04e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02149 - - gmx:100775400 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02149 12 27397647 27398430 Seca12g02149 12 27397647 27398430 PCT