Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02141 ATGAAGTTCGCCTTATACCTAGTGATTTTCCTTCTCTTTCTCTTTCAAAGCTCATCAAATTGCTCCAATCTTATCCATCAATCTTGCAGGGAAGCCTCCAAGAATGACCCAAATTTGAGCTATAATTTCTGTGTCACATCCCTCAATGAGGCTGCCTCCAAGAGCAAACCCCCTAACAACCTTGAAGATCTTGTGGGCATGTCCATTCAGCTAACAAAGTCAAATGGAACCAATATCATTTCCATCATTTCAGGGCTCTTGAAGAACTCAAGTTCTGATCAATATGTCAAGGCTTGTCTACAAGATTGCTTTGATCTTTACAAAGATTCCCTTTCAGCTATAGAAGATGCTATGGTTGCTTTCAAGTCCAAGGATTTGGACACAGCTGCTATAAAAATGAGTGCTTCCTTGGATGATTCAGTTACCTGTGAAGATCAATTCAAGGATAAGAAAGGTGAAATGTCCCCTTTAACAAAGGAGAACAACATTTACTTTGAACTCAATGTAATAGCTCTGGCTTTCATTCAAATGTCTCGTTAA 540 0.3907 MKFALYLVIFLLFLFQSSSNCSNLIHQSCREASKNDPNLSYNFCVTSLNEAASKSKPPNNLEDLVGMSIQLTKSNGTNIISIISGLLKNSSSDQYVKACLQDCFDLYKDSLSAIEDAMVAFKSKDLDTAAIKMSASLDDSVTCEDQFKDKKGEMSPLTKENNIYFELNVIALAFIQMSR. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02141 179 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 177 IPR035513 -
Seca12g02141 179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 177 IPR035513 -
Seca12g02141 179 SMART PMEI_2 20 174 IPR006501 GO:0004857
Seca12g02141 179 NCBIfam pectinesterase inhibitor domain 1 177 IPR006501 GO:0004857
Seca12g02141 179 PANTHER OS02G0537100 PROTEIN 1 177 - -
Seca12g02141 179 Pfam Plant invertase/pectin methylesterase inhibitor 23 173 IPR006501 GO:0004857
Seca12g02141 179 CDD PMEI-Pla_a_1_like 29 177 IPR034088 -
Seca12g02141 179 FunFam Putative invertase inhibitor 20 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02141 Seca-Chr12 27261275 27261814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02141 - - gmx:100817110 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02141 12 27261275 27261814 Seca12g02141 12 27261275 27261814 ECH