Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02128 ATGGATAACTGGCACAGCTATAAACTACCTCCTGATCAGCAAGAATACTCTAATGAGGTTGAAGGAGATGGTAGAGTGGAGCCTTCAGATGATGAACTTTCTGATCTGTCACGAGCTTGTGAAAAACTTTGGGATCTTGATTTAAATCGTTTGGTACCTGGAAAGGACTATGAAATTGACTGTGGTGATGGGAAAAAGGCTTACCAAAAGGAAGATATGGCACAGGGGAGCTTGTTTACTTGGGTTAGTGATGATGTATTCCGAAAGCCAACTTTTGCTCGTTTTCTTTCACTTTTAGATAATTACAACCCACATCAAGGAAGTAAGGAAGTTGTCACATCTGAAGAGAGACAAGAGCAAGCTTCTTTCATAGAAGAAATCAGTAGAACAGCACCAATTAAATATCTTCACAAGTTTCTTGCATCCAGGGGAATTGCATCAGGGAGTTACCAAGATTTCAAAAGAATGATGACTAGTCTGTGGTTTGACCTTTATAGCCGTGGTGGCACTTCTGGTTCCTCCTCTGCTTTTGAACATGTTTTTGTTGGAGAAATCAAACAATGTGGTGAAGTTTCTGGATTTCATAACTGGCTACAGTTTTACCTTGAAGAAGCAAAGGGGAGAGTTGATTATCAAGGCTATATCTTTCCCCGTCGACGAGGAGAAATTCCTGACTCTGAAACCCAGCTTCTGACAATTCAGTTTGAATGGAATGGTGTTCTGAAATCTGTATCAAGCACTTTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTATGCCGGTGAGGAAGATAACCACATTCAGCTTGGCCCATATGCAGTAAATATCAAGTGCTATCGTCATGGCAATCAAATTGGATCTGTTTTCCCCATTGCAGATTCTTGA 903 0.4075 MDNWHSYKLPPDQQEYSNEVEGDGRVEPSDDELSDLSRACEKLWDLDLNRLVPGKDYEIDCGDGKKAYQKEDMAQGSLFTWVSDDVFRKPTFARFLSLLDNYNPHQGSKEVVTSEERQEQASFIEEISRTAPIKYLHKFLASRGIASGSYQDFKRMMTSLWFDLYSRGGTSGSSSAFEHVFVGEIKQCGEVSGFHNWLQFYLEEAKGRVDYQGYIFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYAGEEDNHIQLGPYAVNIKCYRHGNQIGSVFPIADS. 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02128 300 Pfam Endoribonuclease XendoU 35 296 IPR018998 GO:0004521
Seca12g02128 300 SUPERFAMILY EndoU-like 34 298 IPR037227 -
Seca12g02128 300 CDD XendoU 29 296 IPR018998 GO:0004521
Seca12g02128 300 MobiDBLite consensus disorder prediction 1 32 - -
Seca12g02128 300 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 32 300 IPR018998 GO:0004521
Seca12g02128 300 MobiDBLite consensus disorder prediction 18 32 - -
Seca12g02128 300 PANTHER PLACENTAL PROTEIN 11-RELATED 21 299 IPR039787 GO:0004521
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02128 Seca-Chr12 26841524 26843926 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02128 K14648 - gmx:100813919 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02128 12 26841524 26843926 Seca12g02128 12 26841524 26843926 ECH